Plasmid_Backbone
Part:BBa_K3425001
Designed by: Núria Garriga Alonso Group: iGEM20_UofUppsala (2020-10-19)
pSB3C11: Improved pEven1 Loop Vector based on pSB3C01
iGEM Type IIS Vectors
pEven Loop Vectors (for Level 2)
When four Level 1 parts (TUs) are assembled into a Multi-Transcriptional Unit (MTU) into the following plasmid backbones (with BBa_J04455), the MTU will be flanked by BsaI restriction sites and these 4 bp Fusion Sites.
Part number | Name | Loop Name | Fusion Site 5' | MTU | Fusion Site 3' |
---|---|---|---|---|---|
BBa_K3425001 | pSB3C11 | pEven1 | GGAG | MTU 1 | TACT |
BBa_K3425002 | pSB3C12 | pEven2 | TACT | MTU 2 | AATG |
BBa_K3425003 | pSB3C13 | pEven3 | AATG | MTU 3 | GCTT |
BBa_K3425004 | pSB3C14 | pEven4 | GCTT | MTU 4 | CGCT |
The iGEM Type IIS assembly standard is based on MoClo and Loop
- A Modular Cloning System for Standardized Assembly of Multigene Constructs
- Loop assembly: a simple and open system for recursive fabrication of DNA circuits
Note: This section was adapted from pSB3C01 in order to collect all the information in one page.
Sequence and Features
Assembly Compatibility:
- 10INCOMPATIBLE WITH RFC[10]Plasmid lacks a prefix.
Plasmid lacks a suffix.
Illegal EcoRI site found at 2713
Illegal PstI site found at 12 - 12INCOMPATIBLE WITH RFC[12]Plasmid lacks a prefix.
Plasmid lacks a suffix.
Illegal EcoRI site found at 2713
Illegal NheI site found at 1399
Illegal PstI site found at 12 - 21INCOMPATIBLE WITH RFC[21]Plasmid lacks a prefix.
Plasmid lacks a suffix.
Illegal EcoRI site found at 2713 - 23INCOMPATIBLE WITH RFC[23]Plasmid lacks a prefix.
Plasmid lacks a suffix.
Illegal EcoRI site found at 2713
Illegal PstI site found at 12 - 25INCOMPATIBLE WITH RFC[25]Plasmid lacks a prefix.
Plasmid lacks a suffix.
Illegal EcoRI site found at 2713
Illegal PstI site found at 12
Illegal AgeI site found at 990
Illegal AgeI site found at 1313 - 1000INCOMPATIBLE WITH RFC[1000]Plasmid lacks a prefix.
Plasmid lacks a suffix.
Illegal BsaI site found at 2719
Illegal BsaI.rc site found at 6
[edit]
Categories
Parameters
//collections/typeiis/uppsala
//plasmidbackbone/assembly/typeiis
//plasmidbackbone/copynumber/medium
//plasmidbackbone/assembly/typeiis
//plasmidbackbone/copynumber/medium
insert | RFP-device (J04455) |
origin | p15A |
resistance | C |