Coding

Part:BBa_K3515013

Designed by: Kody Klupt, Sono Khan   Group: iGEM20_Queens_Canada   (2020-06-16)
Revision as of 14:26, 16 June 2020 by Registry (Talk | contribs)

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Parathyroid Hormone Receptor with cysteine modification(s) and FRET to monitor PTH levels using a b

The parathyroid hormone receptor (PTHR) selectively binds parathyroid hormone (PTH) in its N- terminal extracellular domain. A fluorophore may be attached to the N- terminal domain as well to create a FRET signal. This makes it a distinguishable candidate for PTH monitoring using fluorescence resonance energy transfer (FRET). Coupling this protein with a supply of PTH bound to a second fluorophore can create a competition assay, where PTH and PTH-fluorophore compete with one another for PTHR. This composite part has added the N- terminal extracellular domain of PTHR to mNeonGreen. It would be used in conjungtion with a PTH peptide fragment bound to mCherry via its lysine amino acid side chain. As these two fluorophores come together FRET can be quantified. If PTH from the body competed with PTH-mCherry it is expected that the FRET signal would decrease. PTH detection is vital as PTH directly regulates renal function and is also a primary regulator of calcium levels. PTH is also a crucial biomarker used in clinical medicine for tracking the progression and status of Chronic Kidney Disease (CKD) patients. As such a biosensor for PTH tracking may be of great interest to patients and clinicians. This part includes the N- terminal extracellular domain of PTHR with a cysteine residue that will bind cysteine linker arms and be used for biosensor immobilization allowing the detection of PTH. The FRET pair used in this construction were considered especially for physiological detection of phosphate as they have a high intensity and are therefore able to have an expanded dynamic linear range of detection.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 821
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 737
  • 1000
    COMPATIBLE WITH RFC[1000]


[edit]
Categories
//chassis/prokaryote/ecoli
Parameters
None