Regulatory

Part:BBa_K2572000

Designed by: Shan Jiang   Group: iGEM18_RDFZ-China   (2018-10-06)
Revision as of 23:36, 17 October 2018 by K1230 (Talk | contribs)


TlpA39 thermal regulator

TlpA39 is from Salmonella typhimurium,quite similar to TlpA36 (BBa_K2447012).It is a temperature sensitive protein which is capable of binding to promoter pTlpA. Under temperature of above 39 degrees Celsius, TlpA39 protein would stay in monomeric form and hence it loses the ability to bind to the promoter pTlpA39. If the temperature drops below 39 degree Celsius, TlpA39 proteins would form dimers; which are capable of repressing the pTlpA promoter and prevent the recruitment of RNA polymerase to repress downstream gene expression. <a href="https://parts.igem.org/Part:BBa_K2447012">BBa_K2447012**</a>

In our work, we characterized its threshold temperature. We found that expression is not detected on the microplate spectrophotometre at 37 degrees Celsius(but the plate showed a little florescence), and the downstream gene is fully expressed at 39 degrees Celsius.

We characterized a set of thermal sensitive regulators by culturing them under different temperature, and read them on a petri dish or plate reader. 800px-T--RDFZ-China--TSRquali.jpeg

We can see that at 35 degree Celsius, TlpA36-K2447012 starts to derepress. At 37 degree Celsius, TlpA39-K2572000 starts to derepress. At 39.5 degree Celsius, Tcl42-K2572001 starts to express. So they do initiate at different temperature. T--RDFZ-China--TSR.png Also, we can see there are differences of expression for same regulators are different under different temperature.


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NotI site found at 508
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal XhoI site found at 793
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 1096
  • 1000
    COMPATIBLE WITH RFC[1000]



https://parts.igem.org/Part:BBa_K2447012

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