Composite

Part:BBa_K2999003

Designed by: Jinshui Lin   Group: iGEM19_YAU-China   (2019-10-14)
Revision as of 08:50, 15 October 2019 by Marxin (Talk | contribs) (→‎Usage and Biology)


ptac+RBS+PelA+RBS+PslG

Biofilm is a complex bacterial community embedded in the extracellular matrix composed of proteins, extracellular DNA (eDNA) and extracellular polysaccharides. Pseudomonas aeruginosa PAO1 has two types of biofilm, Psl and Pel. This part is mainly used for encoding polysaccharide hydrolases PslG and PelA, and destroying the structure of biofilm.


Usage and Biology

YAU-China expressed the biofilm-damaged system in 2019, using extracts from each part of the system for experiments. The control group (PBS treated biofilm), PelA treated biofilm, PslG treated biofilm, PelA and PslG treated biofilm together. The biofilm was added to the PV plate and pretreated for 24 hours. The biofilm was washed out with absolute ethanol and detected by enzyme labeling instrument.

Figure 1. Effects of PelA and PslG on Biofilm


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NotI site found at 769
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 2922
    Illegal BglII site found at 3798
    Illegal BamHI site found at 1905
    Illegal BamHI site found at 2070
    Illegal XhoI site found at 3802
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 686
    Illegal NgoMIV site found at 710
    Illegal NgoMIV site found at 731
    Illegal NgoMIV site found at 832
    Illegal NgoMIV site found at 1058
    Illegal NgoMIV site found at 1766
    Illegal NgoMIV site found at 1815
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 1652
    Illegal BsaI site found at 2278
    Illegal BsaI.rc site found at 1853


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Categories
Parameters
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