Coding

Part:BBa_K2685001

Designed by: LIN, WENXIN   Group: iGEM18_TUST_China   (2018-10-05)
Revision as of 22:41, 5 October 2018 by Registry (Talk | contribs)

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Manganese Peroxidases


  Manganese peroxidase (MnP) is the most common lignin-modifying peroxidase produced by almost all wood-colonizing basidiomycetes causing white-rot and various soil-colonizing litter-decomposing fungi. Multiple forms of this glycosylated heme protein with molecular weights normally at 40 to 50 kDa are secreted by ligninolytic fungi into their microenvironment. There, MnP preferentially oxidizes manganese(II) ions (Mn2+), always present in wood and soils, into highly reactive Mn3+, which is stabilized by fungal chelators such as oxalic acid. Chelated Mn3+ in turn acts as low-molecular weight, diffusible redox-mediator that attacks phenolic lignin structures resulting in the formation of instable free radicals that tend to disintegrate spontaneously. MnP is capable of oxidizing and depolymerizing natural and synthetic lignins as well as entire lignocelluloses (milled straw or wood, pulp) in cell-free systems (in vitro). In vitro depolymerization is enhanced in the presence of co-oxidants such as thiols (e.g. glutathione) or unsaturated fatty acids and their derivatives 
  In this year, we use this special peroxidase to degradate the tetracycline in the degradation parts.We also have optimized this enzyme condon to better express in our constructive chasis.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 1126
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 957
    Illegal AgeI site found at 706
    Illegal AgeI site found at 751
    Illegal AgeI site found at 949
    Illegal AgeI site found at 979
  • 1000
    COMPATIBLE WITH RFC[1000]


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Categories
Parameters
None