Project
rhlAB

Part:BBa_K424018

Designed by: Team Panama iGEM 2010   Group: iGEM10_Panama   (2010-10-11)
Revision as of 03:36, 28 October 2010 by Ernestopro (Talk | contribs)

Rhamnosiltransferase BioBrick (Rh1AB_BB)

Pseudomonas aeruginosa species of bacteria produce the natural rhamnosyltransferase gene complex (RhlAB) that is the key enzyme responsible for transferring the rhamnose moiety to the b-hydroxyalkanoic acid moiety to biosynthesize rhamnolipid that is a biomolecule with biosurfactant propierties but the natural RhlAB gene have illegal restriction sites that make it incompatible with the Assembly Standard 10.

How to used it as a BioBrick? We developed this standarized part to be inserted into E. coli for rhamnolipid production through the mutation of the key enzyme rhamnosyltranferase (RhlAB) to be compatible with Assembly Standard 10 . For this we do to the natural RhlAB gene a QuikChange Lightning Multi Site-Directed Mutagenesis following the Kit manual Instruction from Stratagene. This rhamnosyltransferase BioBrick (Rh1AB_BB) is ready to be tested on a test plataform device according to the Assembly Standard Protocol 10 from parts of the registry.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 169
    Illegal BamHI site found at 729
    Illegal XhoI site found at 905
    Illegal XhoI site found at 2191
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 1084
    Illegal NgoMIV site found at 1805
    Illegal NgoMIV site found at 1918
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 394
    Illegal BsaI site found at 1434
    Illegal BsaI.rc site found at 578


[edit]
Categories
//chassis/prokaryote/ecoli
//function/biosynthesis
Parameters
biology
n/aRhamnosiltransferase mutated gene complex (Rh1AB_BB)