Coding

Part:BBa_K1933011

Designed by: Sora Matsumoto, Tomoki Uchino   Group: iGEM16_Kyoto   (2016-10-17)
Revision as of 18:50, 18 October 2016 by Sora (Talk | contribs) (→‎Usage and Biology)


INPNC fused to 6xHis tag without stop codon

INPNC codes for N- and C- terminal domain of Ice-Nucleation Protein (INP) from Pseudomonas syringae , connected by a 6xHis tag to be easily identified by Western blotting[1]. This is used as an anchoring motif for the cell surface display of passengers. This domain does not have signal peptide for anchoring on the cell surface[2]. Surface displayed passengers retain enzyme activity even when it is linked to INPNC with 6xHis tag.


For more information, please visit [http://2016.igem.org/Team:Kyoto our wiki]

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 952
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 72
    Illegal NgoMIV site found at 405
    Illegal AgeI site found at 823
  • 1000
    COMPATIBLE WITH RFC[1000]


Usage and Biology

Since ☆BBa_K1933001 contains stop codon within its sequence, we registered this part for registration of ☆BBa_K1933100, BBa_K1933101, ☆BBa_K1933200.

Reference

[1]Yim, Sung-Kun, et al. "Surface display of heme-and diflavin-containing cytochrome P450 BM3 in Escherichia coli : a whole cell biocatalyst for oxidation." Journal of microbiology and biotechnology, 20.4, (2010): 712-717.

[2]Park, Tae Jung, et al. "Surface display of recombinant proteins on Escherichia coli by BclA exosporium of Bacillus anthracis. " Microbial cell factories, 12.1, (2013): 1.

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