Composite

Part:BBa_K1995019

Designed by: He Jindian   Group: iGEM16_Lanzhou   (2016-10-13)
Revision as of 13:50, 16 October 2016 by Freak9631 (Talk | contribs)


CC (INP-N-GFP-CC)

Based on BBa_K1995018 (BCC), we added INP-N and GFP to the upstream of BCC. Using INP-N, we anchored GFP and BCC out of the outer membrane of E.coli in order to increase the binding efficiency and using GFP to detect the concentration of cupric and mercuric ions.

Ice nucleation protein (INP)

We used INP to anchor GFP and BCC out of the outer membrane of E. coli, firstly increasing the probability of the meeting of BCC and heavy metal ions and secondly using the fluorescence quenching of GFP to detect the concentration of heavy metal ions.

Ice nucleation protein (INP) is an excretion surface protein. It is widely used for establishing germ surface display system. It contains an internal repeated domain (IRD) and an N-terminal anchoring domain (fig.1). Studies have shown that decrease the time of repetition of IRD can also get a better-off rate of displaying. So we decreased the time of repetition of IRD to reduce pressure of synthesis of E. coli.

INP.png

GFP reporter

GFP is an excellent reporter in synthetic biology. We add GFP into CC for following functions:

① Initial survey of the expression of CC.

② Detect the binding efficiency and other features of CC.

③ Detect and measure the concentration of cupric and mercuric ions.

Binding heavy metals

We detect the binding efficiency of CC and other parts and get the following chart. (fig.2)

LZU China-2016-Fig.2 Hg2+ binding efficiency of PC, CC, CCW.png

fig 2

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 429
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI.rc site found at 1181
    Illegal SapI.rc site found at 238


[edit]
Categories
Parameters
None