Coding

Part:BBa_K1470002

Designed by: Pascal Sartor   Group: iGEM14_Freiburg   (2014-10-02)
Revision as of 12:10, 2 October 2014 by Suricate (Talk | contribs)

Galactose-induced gene 4 DNA binding domain (Gal4DBD)

This protein from Saccharomyces cerevisiae is a positive transcriptional regulator for the gene expression of the galactose-induced genes such as GAL1, GAL2, GAL7, GAL10, and MEL1 which are important for galactose import and conversion to glucose [1].
It recognizes a 17 base pair sequence (5'-CGGN11CCG-3') in the upstream activating sequence (UAS-G) of these genes. [2]
GAL4 is used to investigate gene expressions in several organisms (bacteria, plants, fruit flyes) [3].
The protein is controlled by a strong promotor. Binding to UAS-G leads to the expression and detection of the corresponding gene, GFP for example.

References

[1] TRAVEN, A., JELICIC, B., SOPTA, M.: Yeast Gal4: a transcriptional paradigm revisited. EMBO Rep. May 2006; 7(5): 496–499.
[2] CAMPBELL, R.N., LEVERENTZ, M.L., RYAN, L.A., REECE, R.J.: Metabolic control of transcription: paradigms and lessons from Saccharomyces cerevisiae. Biochem. J. (2008) 414 (177–187). [3] BRAND, AH., PERRIMON, N.: Targeted gene expression as a means of altering cell fates and generating dominant phenotypes. Development. 1993 Jun;118(2):401-15.

Usage and Biology

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal XhoI site found at 218
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 137


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Categories
Parameters
None