Part:BBa_K598001
Theophylline Responsive Riboswitch 1G1 with Engineered RBS+GFP generator
This is a GFP generator regulated by theophylline responsive riboswitch. mRNA with a theophylline riboswitch in it responds to theophylline concerntration, producing different fluorescence strength of GFP. Regulated by different promoters, it would be used to demonstrate theophylline responsive curve, providing data for modeling.
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21INCOMPATIBLE WITH RFC[21]Illegal XhoI site found at 71
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI.rc site found at 730
Background
Riboswitches are structural domains embedded within the non-coding region of mRNA, performing as RNA-based genetic control elements that regulate gene expression in a ligand-dependent manner through direct, small molecule-RNA interactions without assistance of proteins. Over past several years, a number of natural riboswitches have been reported in literatures, sensing small molecules including coenzyme B1 and B12, FMN, SAM, lysine, guanine, adenine, TPP and theophylline [1]. Riboswitches are typically comprised of an aptamer domain, which recognizes a specific ligand with high specificity and affinity folding as a binding pocket [2]. The binding induces structural reorganization of aptamer and consequently influences the folding of adjoining expression platform, which varies due to different mechanisms of regulation.
//function/reporter/fluorescence
//regulation/positive
//rna/riboswitch
regulator
chassis | E. coli DH5α |
emit | 511 nm |
excite | 501 nm |
ligands | theophylline |
n/a | Theophylline Responsive Riboswitch 1G1 with Engineered RBS+GFP generator |
output | GFP |
rbs | robust |
resistance | Chloramphenicol |