Composite

Part:BBa_K568001:Design

Designed by: Team TU Munich 2011   Group: iGEM11_TU_Munich   (2011-09-01)
Revision as of 21:14, 14 September 2011 by Thorsten mueller (Talk | contribs) (→‎Design Notes)

Optogenetical AND-Gate red/blue light


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 7
    Illegal NheI site found at 30
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 644
    Illegal XhoI site found at 1786
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 971
    Illegal AgeI site found at 3817
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 3820


Design Notes

We used YcgF/E as blue light sensor and Cph8 as red light sensor. We expect that this assembly will be the one with the lowest amount of unspecific gene expression which could occur due to overlapping of the absorption spectrums of the sensory domains.

Source

Designed from existing Biobricks.

High Fidelity PCR was performed on K322127 (Red Light Sensor Part with lacZ promoter) to amplify the region withouth RBS and LacZ. The PCR product contains pcyA, heme oxygenase, as well as cph8 and ompC promoter (correspond to parts K322123, K322124 and R0082, which form BBa_K568000). This PCR product was assembled with a synthesized construct containing the small parts of the AND-Gate (BBa_K568006). The final step was ligating this intermediate part BBa_K568005 with T7ptag (BBa_K228000).

References