Reporter

Part:BBa_K191004:Design

Designed by: Le Thanh Tu NGUYEN   Group: iGEM09_EPF-Lausanne   (2009-10-11)
Revision as of 16:26, 21 October 2009 by Nltt1987 (Talk | contribs) (→‎Design Notes)

TRP promoter - RBS - RFP - Term


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal SpeI site found at 43
    Illegal SpeI site found at 51
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal SpeI site found at 43
    Illegal SpeI site found at 51
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal SpeI site found at 43
    Illegal SpeI site found at 51
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal SpeI site found at 43
    Illegal SpeI site found at 51
    Illegal AgeI site found at 666
    Illegal AgeI site found at 778
  • 1000
    COMPATIBLE WITH RFC[1000]


Design Notes

  • This BioBrick was synthesized using the protocol we developed with the Klenow fragment([http://2009.igem.org/wiki/index.php?title=Team:EPF-Lausanne/Protocols/Klenow complete protocol]).
  • To do this, two long primers which together contained the sequence for the Trp promoter were ordered:

Forward primer: 5'-gtttcttcgaattcgcggccgcttctagagtaatcatcgaactagttaactagtacgcaag-3' Reverse primer: 5'-gctagcgaacttgcgtactagttaactagttcgatg-3'

  • These primers could self-anneal in the reaction mix, and the second strands that were missing at the extremities of the primers were fully synthesized using the Klenow fragment, instead of a classic extension using the TAQ DNA Polymerase.
  • Double strand Trp promoter was cut with E and S to be ligated into plasmid with RFP gene (BBa_I13507).

Source

BBa_K191007, BBa_I13507

References