Coding

Part:BBa_K4960026

Designed by: Yu Chang   Group: iGEM23_NUDT-CHINA   (2023-10-10)
Revision as of 20:38, 10 October 2023 by Palpitate (Talk | contribs)

pvc13 NTD-1*GGSGG-CKGGRAKDC-1*GGSGG-pvc13 CTD

A flexible linker which can influence the structure of tail fiber connected to the CKGGRAKDC.

Profile

Name: pvc13_NTD-1*GGGSG-CKGGRAKDC-1*GGGSG-pvc13_CTD
Base Pairs: 1362bp
Origin: Synthetic
Properties: A flexible linker which can influence the structure of tail fiber connected to the CKGGRAKDC.

Usage and Biology

As an indispensable component of recombinant fusion proteins, linkers have shown increasing importance in the construction of bioactive fusion proteins.[1] (GGGGS)n is a commonly used flexible linker. Here, we use (GGGGS)1 to influence the structure of tail fiber connected to the CKGGRAKDC.

Figure 1.Schematic diagram of the influence of different Linkers on the structure of tail fibers

Figure 2.PVC illustration

Figure 3.Horizontal cutaway view of the fiber region of the syringe.

Special Design

Use the flexible linker on both sides of the CKGGRAKDC to affect the structure and function of the tail protein.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 309
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]

References

[1] Chen, X., Zaro, J. L., & Shen, W. C. (2013). Fusion protein linkers: property, design and functionality. Advanced drug delivery reviews, 65(10), 1357–1369.

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Parameters
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