Coding

Part:BBa_K3900001

Designed by: Lennart Lutz   Group: iGEM21_Bielefeld-CeBiTec   (2021-09-21)
Revision as of 17:12, 21 October 2021 by Lennart lutz (Talk | contribs)


Ribose Binding Protein (RBP)

Sequence of the Ribose Binding Protein from Escherichia coli.

Usage and Biology

The ribose binding protein (RBP) is a periplasmatic receptor protein found in E. coli. If it binds ribose it changes conformation. Through the force of the molecular interactions with ribose from both sides of the molecules it is slightly tiltet in the middle. Conformational change allows the entry of the ligand in the cell and further interactions of the receptor with other molecules of the following signal cascade. [1] The structure of RBP is depicted in Figure 1.



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Figure 1: Structure of the ribose binding protein from E. coli.


[1] https://www.rcsb.org/structure/1URP

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal PstI site found at 385
    Illegal PstI site found at 601
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal PstI site found at 385
    Illegal PstI site found at 601
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal PstI site found at 385
    Illegal PstI site found at 601
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal PstI site found at 385
    Illegal PstI site found at 601
    Illegal NgoMIV site found at 480
  • 1000
    COMPATIBLE WITH RFC[1000]


[edit]
Categories
Parameters
None