Device

Part:BBa_K3629015

Designed by: Sravya Kakumanu   Group: iGEM20_Calgary   (2020-10-17)
Revision as of 23:04, 27 October 2020 by Sravyakakumanu (Talk | contribs) (Usage and Biology)


Nourseothricin resistance expression construct with gibson homology sequences

Usage and Biology

This is the expression construct for nourseothricin resistance, which is a robust selection marker that can be used in many eukaryotes, specifically yeast, including Yarrowia lipolytica -the chassis for our project. Particularly for Y. lipolytica there are not many available auxotrophy-based selection markers due to the limited number of auxotrophic strains publically available for use. Therefore, antibiotic resistance genes are a suitable alternative. To use this selection marker, 50-200µg/mL is added to media depending on the organism.

The part is a key part of our collection and functions as a destination vector for other Y. lipolytica parts when cloned into a plasmid.

Design

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal prefix found in sequence at 1
    Illegal suffix found in sequence at 1590
    Illegal EcoRI site found at 1449
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal EcoRI site found at 1
    Illegal EcoRI site found at 1449
    Illegal NheI site found at 1584
    Illegal SpeI site found at 1591
    Illegal PstI site found at 1605
    Illegal NotI site found at 7
    Illegal NotI site found at 1598
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal EcoRI site found at 1
    Illegal EcoRI site found at 1449
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal prefix found in sequence at 1
    Illegal suffix found in sequence at 1591
    Illegal EcoRI site found at 1449
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal prefix found in sequence at 1
    Illegal EcoRI site found at 1449
    Illegal XbaI site found at 16
    Illegal SpeI site found at 1591
    Illegal PstI site found at 1605
  • 1000
    COMPATIBLE WITH RFC[1000]


[edit]
Categories
Parameters
None