Plasmid_Backbone

Part:BBa_K3425001

Designed by: Núria Garriga Alonso   Group: iGEM20_UofUppsala   (2020-10-19)
Revision as of 10:50, 20 October 2020 by Nuria GA (Talk | contribs)


pSB3C11: Improved pEven1 Loop Vector based on pSB3C01


iGEM Type IIS Vectors

pEven Loop Vectors (for Level 2)

When four Level 1 parts (TUs) are assembled into a Multi-Transcriptional Unit (MTU) into the following plasmid backbones (with BBa_J04455), the MTU will be flanked by BsaI restriction sites and these 4 bp Fusion Sites.

Part number Name Loop Name Fusion Site 5' MTU Fusion Site 3'
BBa_K3425001 pSB3C11 pEven1 GGAG MTU 1 TACT
BBa_K3425002 pSB3C12 pEven2 TACT MTU 2 AATG
BBa_K3425003 pSB3C13 pEven3 AATG MTU 3 GCTT
BBa_K3425004 pSB3C14 pEven4 GCTT MTU 4 CGCT


The iGEM Type IIS assembly standard is based on MoClo and Loop

Note: This section was adapted from pSB3C01 in order to collect all the information in one page.

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 2713
    Illegal PstI site found at 12
  • 12
    INCOMPATIBLE WITH RFC[12]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 2713
    Illegal NheI site found at 1399
    Illegal PstI site found at 12
  • 21
    INCOMPATIBLE WITH RFC[21]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 2713
  • 23
    INCOMPATIBLE WITH RFC[23]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 2713
    Illegal PstI site found at 12
  • 25
    INCOMPATIBLE WITH RFC[25]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 2713
    Illegal PstI site found at 12
    Illegal AgeI site found at 990
    Illegal AgeI site found at 1313
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal BsaI site found at 2719
    Illegal BsaI.rc site found at 6


[edit]
Categories
//collections/typeiis/uppsala
//plasmidbackbone/assembly/typeiis
//plasmidbackbone/copynumber/medium
Parameters
insertRFP-device (J04455)
originp15A
resistanceC