RBS
Part:BBa_K3425033
Designed by: Tereza Hubackova Group: iGEM20_UofUppsala (2020-10-13)
iGEM Type IIS pSB1K03-DY
This part (BBa_K3425025) is an RBS (BBa_B0030) modified for Type IIS iGEM Standard assembly (RFC 1000)by adding five nucleotides (TAGTA) to the end of the sequence.
Five to six nucleotides is the optimal distance between the RBS and the ATG start codon for E. coli (see https://parts.igem.org/Ribosome_Binding_Sites/Design for more general information). Whereas Biobrick assembly generates six-nucleotide scar, Type IIS iGEM Standard assembly generates only one-nucleotide scar between RBS and ATG. To keep the distance optimal, five nucleotides were added to the BBa_B0030 for its use in Type IIS assembly.
Sequence and Features
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]
[edit]
Categories
Parameters
//chassis/prokaryote/ecoli
//collections
//collections/typeiis/uppsala
//direction/forward
//rbs/prokaryote/constitutive/community
//rbs/prokaryote/constitutive/constitutive
//regulation/constitutive
//collections
//collections/typeiis/uppsala
//direction/forward
//rbs/prokaryote/constitutive/community
//rbs/prokaryote/constitutive/constitutive
//regulation/constitutive
chassis | E. coli |
direction | forward |
function | protein expression regulation |
rbs | constitutive |