Coding

Part:BBa_K2609000

Designed by: Bhaskar Kumawat   Group: iGEM18_IISc-Bangalore   (2018-09-22)
Revision as of 21:22, 9 October 2018 by BhaskarK (Talk | contribs) (Characterization)


Murine JE/MCP-1

Member of CC chemokine family that uses the CCR2 receptor for chemo-attracting monocytes to the site of release (also called monocyte chemoattractant protein - 1). This coding sequence lacks the heavily glycosylated C-terminus present in the wild-type protein and has been shown to have a increased chemotactic potency[1][2]. The protein can be expressed recombinantly in a prokaryotic system because of its lack of glycosylation and post-translational modifications.


Usage and Biology

Biology

Mcp-1 belongs to the CC family of chemokines and is recognised by the CCR2 receptors found on murine monocytes. Due to its inherent homology to human CCL2, it acts as a effective chemokine for human moncytes as well. The N-term region of the protein has been implicated in receptor binding and any fusion to this terminal might result in decreased activity. In both mice and humans, the chemokine is produced by a wide variety of cell types including endothelial,fibroblasts, epithelial, smooth muscle, mesangial, astrocytic, monocytic, and microglial cells. Apart from monocytes, CCL2 has also been shown to chemoattract NK cells and T cells with comparatively lesser efficacy.[2]

Usage

For their Phage Assisted Immune Recruitment (PAIR) system, the 2018 IISc-Bangalore iGEM team used the mcp-1 CDS fused with both N-term and C-term secretion tags (PelB and HlyA respectively) for recombination into a phage genome. This engineered phage will recruit phagocytic monocytes to the site of infection and prevent release of bacterial toxins directly into the body.

Characterization

Expression with BBa_K2609007

The protein was expressed under T7 promoter in E. coli BL21 (DE3) with a 6xHis tag connected to the N-term through a TEV protease cleavage site. Small scale induction was done at the temperatures 37°C, 25 °C and 16°C and IPTG concentrations ranging from 100uM to 1mM. The protein was found in inclusion bodies at all temperature with negligible yield at lower temperatures (See 'Solubilization'). The ideal conditions for expression after multiple trials expression were found to be the following:

  • Temperature: 25 °C
  • IPTG Concentration: 250uM
  • Time of induction: 16 hrs (Not optimized)
  • Chloramphenicol concentration: 35ug/ml (Not optimized)
  • Medium: LB (Not optimized)
The protein with the 6xHis and TEV protease tags should be 15.6kDa in size. Bands were seen between 17kDa and 22kDa after induction.

Solubilization with BBa_K2609007

Purification with BBa_K2609007

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


References

[1] Yao, Yao, and Stella E. Tsirka. "Mouse monocyte chemoattractant protein 1 (MCP1) functions as a monomer." The international journal of biochemistry & cell biology 55 (2014): 51-59.

[2] Deshmane, Satish L., et al. "Monocyte chemoattractant protein-1 (MCP-1): an overview." Journal of interferon & cytokine research 29.6 (2009): 313-326.

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