Coding

Part:BBa_K1896002

Designed by: Bob Van Hove, Maarten Van Brempt   Group: iGEM16_UGent_Belgium   (2016-10-12)
Revision as of 13:19, 19 October 2016 by Bvh (Talk | contribs)


inaZ (GG safe)

This is an improved version of BBa_K584021, which contains the ice nucleating protein gene inaZ from Pseudomonas syringae. Two BsaI sites have been removed to make the part safe for Golden Gate cloning. The N-terminal domain directs the protein to the outer cell membrane where a central repeat domain catalyses the formation of ice crystals by binding water molecules of water in a manner that resembles the lattice structure of ice. [1]



Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 646
    Illegal NgoMIV site found at 2158
    Illegal NgoMIV site found at 2302
    Illegal NgoMIV site found at 2566
    Illegal NgoMIV site found at 2710
    Illegal NgoMIV site found at 2758
    Illegal NgoMIV site found at 2878
    Illegal AgeI site found at 417
    Illegal AgeI site found at 1822
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal SapI.rc site found at 238


References

  1. Pandey, R., Usui, K., Livingstone, R. A., Fischer, S. A., Pfaendtner, J., Backus, E. H., ... & Scheel, J. F. (2016). Ice-nucleating bacteria control the order and dynamics of interfacial water. Science advances, 2(4), e1501630.
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Parameters
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