Composite

Part:BBa_K1638018

Designed by: Jens Sivkr Pettersen   Group: iGEM15_SDU-Denmark   (2015-08-12)
Revision as of 23:11, 15 August 2015 by Jpettersen (Talk | contribs)

hTrx-based scaffold fused to T18 through a flexible linker

This composite part consists of the hTrx-scaffold used for presenting peptide aptamers fused to the T18 domain of CyaA as used in the bacterial two-hybrid system. This part is used in bacterial two-hybrid screening for peptide aptamers against specific targets. When a target candidate is fused to the T25 domain of CyaA, and a peptide aptamer binds the target, the T18 and T25 domain is brought into proximity of one another and the formation of cAMP is induced. When combined with a cAMP reporter system, like a system promoting the transcription of RFP, the presence of red-flourescent bacteria indicates an interaction between the peptide aptamer and the target protein.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 624
    Illegal XhoI site found at 753
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 165
    Illegal NgoMIV site found at 575
    Illegal AgeI site found at 381
  • 1000
    COMPATIBLE WITH RFC[1000]


[edit]
Categories
Parameters
None