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Plasmid_Backbone
B. S. Vect

Part:BBa_K606003

Designed by: Cyrille Pauthenier   Group: iGEM11_Paris_Bettencourt   (2011-07-25)
Revision as of 17:38, 13 August 2011 by Cyrpaut (Talk | contribs)

Multi-host replicative plasmid, for B. Subtilis and E. Coli

This plasmid is an multihost plasmid, replicated both in E. Coli at high copy number (>200) and low copy in B. Subtilis (about 20).

This plasmid is ideal for importing parts in Subtilis: all the cloning can be done in E. Coli, as well as the amplification. Once the plasmid is extracted, you can incorporate it directly in B. Subtilis using electroporation.

This plasmid is Ampicilyn resistant in E. Coli, and is tetracycline resistant in both B. Subtilis and E. Coli.

The biobrick BBa_J04450 is inserted between the E X and SP site, as a negative cloning control in E. Coli

Beware, there is a pT7 promoter hided in the original sequence of one of the plasmid. This plasmid may be incompatible if you are working in a system with T7 polymerase.

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 17
    Illegal XbaI site found at 2
    Illegal SpeI site found at 5918
    Illegal PstI site found at 5904
  • 12
    INCOMPATIBLE WITH RFC[12]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 17
    Illegal SpeI site found at 5918
    Illegal PstI site found at 5904
    Illegal NotI site found at 9
    Illegal NotI site found at 5909
  • 21
    INCOMPATIBLE WITH RFC[21]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 17
  • 23
    INCOMPATIBLE WITH RFC[23]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 17
    Illegal XbaI site found at 2
    Illegal SpeI site found at 5918
    Illegal PstI site found at 5904
  • 25
    INCOMPATIBLE WITH RFC[25]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 17
    Illegal XbaI site found at 2
    Illegal SpeI site found at 5918
    Illegal PstI site found at 5904
    Illegal NgoMIV site found at 3573
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal BsaI site found at 2560
    Illegal BsaI site found at 4550
    Illegal SapI.rc site found at 5632


[edit]
Categories
//chassis/prokaryote/bsubtilis
//chassis/prokaryote/ecoli
//plasmidbackbone/copynumber/low
Parameters
chassisNew chassis
resistanceTet in Subtilis, Amp in E. Coli