Difference between revisions of "Part:BBa K3482016"
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The CcdB toxin tagets the GyrA subunit of the DNA gyrase. The CcdB toxin blocks the GyrA subunit and leads to a break into the double stranded DNA. | The CcdB toxin tagets the GyrA subunit of the DNA gyrase. The CcdB toxin blocks the GyrA subunit and leads to a break into the double stranded DNA. | ||
− | This part will be used in a kill | + | This part will be used in a kill switch system with anohter part containing the antitoxin <html><a style="padding: 0px; margin: 0px;" href="https://parts.igem.org/Part:BBa_K3482020"> BBa_K3482020 </a></html>. |
===Characterization=== | ===Characterization=== | ||
− | Functional | + | Functional kill switch assay with IPTG and aTc gradients on agar plate |
[[File:BBa K3482016 kill-switch plate.png|200px|]] | [[File:BBa K3482016 kill-switch plate.png|200px|]] |
Revision as of 19:44, 27 October 2020
IPTG-inducible ccdb toxin
This part allows for IPTG inducible expression of the CcdB toxin in E. coli which leads to cell death by acting on the DNA gyrase. The action of CcdB leads to the degradation of DNA , which results in cell death. The CcdB toxin tagets the GyrA subunit of the DNA gyrase. The CcdB toxin blocks the GyrA subunit and leads to a break into the double stranded DNA.
This part will be used in a kill switch system with anohter part containing the antitoxin BBa_K3482020 .
Characterization
Functional kill switch assay with IPTG and aTc gradients on agar plate
E.coli Nissle 1917 were transformed with a plasmid containing the part BBa K3482016 and the part BBa_K3482020 (CcdA antitoxin part) and plated with a gradient of aTc and IPTG on agar plate. The plate shows strong activity of the CcdA antitoxin with aTc induction, whereas IPTG induction promotes production of the CcdB toxin, resulting in a number of surviving cells (probable mutants) proportional to the dilution of the plated culture.
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI site found at 307