Difference between revisions of "Part:BBa K2924052"

 
Line 3: Line 3:
 
<partinfo>BBa_K2924052 short</partinfo>
 
<partinfo>BBa_K2924052 short</partinfo>
  
Hpall + SPNprE + alpha s2 + fd terminator
+
PHpaII with RBS expressing SPNprE+ α-s2-casein + 6xHis-tag, terminated by the fd Terminator in Bacillus subtilis.
 +
 
  
<!-- Add more about the biology of this part here
 
 
===Usage and Biology===
 
===Usage and Biology===
 +
<html><p align="justify">
 +
<i>Fig.1: Scheme of construct. The insert, containing the promoter P<sub>Hpall</sub> (<a href="https://parts.igem.org/Part:BBa_K2924043">BBa_K2924043</a>), α-s2-casein gene (<a href="https://parts.igem.org/Part:BBa_K2924027">BBa_K2924027</a>) and the double fd terminator (<a href="https://parts.igem.org/Part:BBa_K2924044">BBa_K2924044</a>), was cloned into the pBSMUl1 backbone with different secretion signals - here: SPNprE (<a href="https://parts.igem.org/Part:BBa_K2924047">BBa_K2924047</a>) </i>
 +
<p align="justify">
 +
This composite part (Fig.1) contains the constitutive promoter P<sub>Hpall</sub> (<a href="https://parts.igem.org/Part:BBa_K2924043">BBa_K2924043</a>), expressing α-s2-casein (<a href="https://parts.igem.org/Part:BBa_K2924027">BBa_K2924027</a>) with the secretion signal SPNprE (<a href="https://parts.igem.org/Part:BBa_K2924047">BBa_K2924047</a>) and the fd terminator (<a href="https://parts.igem.org/Part:BBa_K2924044">BBa_K2924044</a>) for expression and secretion of the protein in <i>Bacillus subtilis</i>.
 +
 +
 +
  
 +
<p align="justify">
 +
<i>B. subtilis</i> is a frequently used expression system for secreting proteins, which can avoid some common problems with intracellular over expressions like low expression rates, improper protein-folding, formation of inclusion bodies or product toxicity. The secretion is achieved by secretion signals, which are fused to proteins, leading to an export of those tagged proteins by different mechanism, while the secretion tag is cleaved of in many cases after successful secretion.
 +
The organism has been widely described and examined; its genome has been fully sequenced and all important genes and metabolic pathways are known. The fundamental architecture of <i>B. subtilis</i> cell wall can ease protein secretion pathways and allow the organism to secrete high levels of extracellular proteins directly into the medium<sup>1</sup>. For food production, the gram positive bacterium is highly favored, given the fact that it is examined as a GRAS organism (generally recognized as safe)<sup>2,3,4</sup>. Furthermore, compared to other organisms, it does not produce endotoxins that are wished to be removed of the final product<sup>5</sup>.
 +
</html>
 
<!-- -->
 
<!-- -->
 
<span class='h3bb'>Sequence and Features</span>
 
<span class='h3bb'>Sequence and Features</span>

Revision as of 16:06, 19 October 2019


Hpall + SPNprE + alpha s2 + fd terminator

PHpaII with RBS expressing SPNprE+ α-s2-casein + 6xHis-tag, terminated by the fd Terminator in Bacillus subtilis.


Usage and Biology

Fig.1: Scheme of construct. The insert, containing the promoter PHpall (BBa_K2924043), α-s2-casein gene (BBa_K2924027) and the double fd terminator (BBa_K2924044), was cloned into the pBSMUl1 backbone with different secretion signals - here: SPNprE (BBa_K2924047)

This composite part (Fig.1) contains the constitutive promoter PHpall (BBa_K2924043), expressing α-s2-casein (BBa_K2924027) with the secretion signal SPNprE (BBa_K2924047) and the fd terminator (BBa_K2924044) for expression and secretion of the protein in Bacillus subtilis.

B. subtilis is a frequently used expression system for secreting proteins, which can avoid some common problems with intracellular over expressions like low expression rates, improper protein-folding, formation of inclusion bodies or product toxicity. The secretion is achieved by secretion signals, which are fused to proteins, leading to an export of those tagged proteins by different mechanism, while the secretion tag is cleaved of in many cases after successful secretion. The organism has been widely described and examined; its genome has been fully sequenced and all important genes and metabolic pathways are known. The fundamental architecture of B. subtilis cell wall can ease protein secretion pathways and allow the organism to secrete high levels of extracellular proteins directly into the medium1. For food production, the gram positive bacterium is highly favored, given the fact that it is examined as a GRAS organism (generally recognized as safe)2,3,4. Furthermore, compared to other organisms, it does not produce endotoxins that are wished to be removed of the final product5. Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 1124
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI.rc site found at 554