Difference between revisions of "Registry/Software Changes"

Latest revision as of 16:35, 10 March 2008

We are now working on the 4th generation of Registry software. We are also starting a Registry Steering Committee. Stay tuned.

Here is a disorganized list of software tasks.

User and group management system More...
Support for alternate assembly methods and the resulting variation in "scars" in the sequence.
- Support for multiple sequences for a part.
Machine readable formats for Registry contents. (e.g. XML, JSON, csv, rdf)
Machine readable formats for part submissions. (e.g. XML, or Excel Spreadsheet)
Provide private sandbox space for laboratories so they can keep their work hidden until it is

published.

New interfaces to the DNA sequencing system.
New text search engine.
Improve part quality:
- Part-type-specific database information (like the new protein coding region information)
- Implementfion of the part promotion and rating system
- Part sequencing and checking for accuracy (some software required)

New features
- Tools to help preparing a part for synthesis
- GENBANK format sequence and feature input and output
- Automatic feature finding as in APE

If you have a new user suggestion, please add it to the page here.

@@ Line 15: / Line 15: @@
 * New text search engine.
 * Improve part quality:
-** Part type specific database information (like the new protein coding region information)
+** Part-type-specific database information (like the new protein coding region information)
-** Implement the part promotion and rating system
+** Implementfion of the part promotion and rating system
-** Get the parts sequenced and checked for accuracy (some software required)
+** Part sequencing and checking for accuracy (some software required)
 * New features
 ** Tools to help preparing a part for synthesis
 ** GENBANK format sequence and feature input and output
-** Automatic feature finding like in APE
+** Automatic feature finding as in APE
 * New documentation under development