Difference between revisions of "Part:BBa K2374003"
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We cloned UAS-TH into shipping backbone pSB1C3 with In-Fusion. Here shows the restriction endonuclease digestion image of pSB1C3-UAS-TH. | We cloned UAS-TH into shipping backbone pSB1C3 with In-Fusion. Here shows the restriction endonuclease digestion image of pSB1C3-UAS-TH. | ||
− | [[File:2017tongji_registry_image_UTH.png|center| | + | [[File:2017tongji_registry_image_UTH.png|center|200px|标题]] |
We also did one site direct mutagenesis for submission:<br> | We also did one site direct mutagenesis for submission:<br> |
Revision as of 19:00, 31 October 2017
ple (Tyrosine 3-monooxygenase, TH) -> (fruit fly)
TH | |
---|---|
Use in | D.melanogaster |
RFC standard | RFC 10 compatible |
Backbone | pSB1C3 |
Submitted by | [http://2017.igem.org/Team:Tongji_China Tongji_China 2017] |
ple (Tyrosine 3-monooxygenase, TH)
ple (TH) is a rate-limiting enzyme in the dopamine’s synthesis, and it plays an important role in the physiology of adrenergic neurons.
Catalytic activity:
L-tyrosine + tetrahydrobiopterin + O2 = L-dopa + 4a-hydroxytetrahydrobiopterin.
This subpathway is part of the pathway dopamine biosynthesis, which is itself part of catecholamine biosynthesis.
Design Notes
ple has three alternatively spliced transcript variants which encode iosforms of TH. We choose isoform B to construct our plasmid.
According to our experiment results to judge, the ple coding sequence is hard to clone from Drosophila 's cDNA library because of its multi-segment repeats. So we recommend that you obtain from the constructed plasmid, or synthesize it directly.
We ordered a synthetic ple from GENEWIZ®, and cloned it into pUAST vector with two restriction sites: EcoRI and XbaI.
We connected TH promoter to GAL4( BBa_K2374004 [1] )and GAL80ts( BBa_K2374002 [2] )respectively, and cloned them into pUAST vector which had been removed the UAS sequence( BBa_K2374008 [3] ), then to microinject them into Drosophila 's eggs. Also we did microinjection with UAS-TH (BBa_K2374003 [4]). After hybridization screening, we got stable modified fruit fly strains. Finally, we did RT-PCR, qPCR and behavioral experiments to test our system. Here shows some results[http://2017.igem.org/Team:Tongji_China/Experiments].
We cloned UAS-TH into shipping backbone pSB1C3 with In-Fusion. Here shows the restriction endonuclease digestion image of pSB1C3-UAS-TH.
We also did one site direct mutagenesis for submission:
Pst I (647) CTGCAG->CTGCTG
Source
GeneCards®: The Human Gene Database [http://www.genecards.org/cgi-bin/carddisp.pl?gene=TH]
NCBI [5]
FlyBase [http://flybase.org/reports/FBgn0005626.html]
References
Janice A. Fischer, et al. GAL4 activates transcription in Drosophila. Nature 332, 853 - 856 (1988)
Sequence and Features
- 10INCOMPATIBLE WITH RFC[10]Illegal PstI site found at 13
Illegal PstI site found at 256 - 12INCOMPATIBLE WITH RFC[12]Illegal PstI site found at 13
Illegal PstI site found at 256 - 21INCOMPATIBLE WITH RFC[21]Illegal BglII site found at 1540
Illegal XhoI site found at 672 - 23INCOMPATIBLE WITH RFC[23]Illegal PstI site found at 13
Illegal PstI site found at 256 - 25INCOMPATIBLE WITH RFC[25]Illegal PstI site found at 13
Illegal PstI site found at 256 - 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI site found at 918
Illegal BsaI site found at 1884
Illegal BsaI.rc site found at 636
Illegal BsaI.rc site found at 1402
Illegal BsaI.rc site found at 1551