Difference between revisions of "Part:BBa K1893000"
Line 3: | Line 3: | ||
<partinfo>BBa_K1893000 short</partinfo> | <partinfo>BBa_K1893000 short</partinfo> | ||
− | The | + | The Las receiver device consists of a constitutively expressed LasR transcription activator [https://parts.igem.org/Part:BBa_C0179 (BBa_C0179)] upstream of a cognate pLas promoter [https://parts.igem.org/Part:BBa_K1893030 (BBa_K1893030)]. LasR is activated in the presence of a 3O-C12-HSL signal and binds to pLas to initiate transcription of a downstream coding sequence. |
− | |||
===Usage and Biology=== | ===Usage and Biology=== | ||
− | < | + | The Las receiver is based on the Las quorum-sensing system from <i>Pseudomonas aeruginosa</i>. Quorum sensing is a naturally occurring mechanism that certain strains of bacteria use to regulate gene expression in response to their population density. These bacteria secrete autoinducer signalling molecules, such as N-acyl homoserine lactones (AHLs), that bind to transcription factors to alter gene expression. |
+ | |||
+ | In this case, the constitutively expressed LasR transcriptional regulator [https://parts.igem.org/Part:BBa_C0179 (BBa_C0179)] is activated by the binding of 3O-C12-AHL, an AHL quorum signal. The activated LasR regulator binds to the LasR-inducible promoter, pLas, to initiate transcription of a downstream gene. | ||
+ | |||
+ | |||
+ | ===Characterisation=== | ||
+ | We characterised the activation range of this device using a GFP reporter. The results of our characterisation experiments can be found here [https://parts.igem.org/Part:BBa_K1893001 (BBa_K1893001)]. | ||
+ | |||
+ | |||
<span class='h3bb'>Sequence and Features</span> | <span class='h3bb'>Sequence and Features</span> | ||
<partinfo>BBa_K1893000 SequenceAndFeatures</partinfo> | <partinfo>BBa_K1893000 SequenceAndFeatures</partinfo> |
Revision as of 03:10, 29 October 2016
Las receiver (LasR+pLas)
The Las receiver device consists of a constitutively expressed LasR transcription activator (BBa_C0179) upstream of a cognate pLas promoter (BBa_K1893030). LasR is activated in the presence of a 3O-C12-HSL signal and binds to pLas to initiate transcription of a downstream coding sequence.
Usage and Biology
The Las receiver is based on the Las quorum-sensing system from Pseudomonas aeruginosa. Quorum sensing is a naturally occurring mechanism that certain strains of bacteria use to regulate gene expression in response to their population density. These bacteria secrete autoinducer signalling molecules, such as N-acyl homoserine lactones (AHLs), that bind to transcription factors to alter gene expression.
In this case, the constitutively expressed LasR transcriptional regulator (BBa_C0179) is activated by the binding of 3O-C12-AHL, an AHL quorum signal. The activated LasR regulator binds to the LasR-inducible promoter, pLas, to initiate transcription of a downstream gene.
Characterisation
We characterised the activation range of this device using a GFP reporter. The results of our characterisation experiments can be found here (BBa_K1893001).
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12INCOMPATIBLE WITH RFC[12]Illegal NheI site found at 7
Illegal NheI site found at 30 - 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal NgoMIV site found at 383
Illegal AgeI site found at 580 - 1000COMPATIBLE WITH RFC[1000]