Difference between revisions of "Part:BBa K1031913"

 
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109-XylS-TT
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== '''Characterization''' ==
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In order to fine-tune the performance of XylS biosensor, we constructed a library of ''Pc'' constitutive promoters at different intensity. BBa_K1031912 is composed of three elements, the constitutive ''Pc'' promoter J23109[https://parts.igem.org/Part:BBa_J23109], coding sequence of XylS and terminator B0015[https://parts.igem.org/Part:BBa_B0015]. ('''Fig 1''')
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<img src="https://static.igem.org/mediawiki/2013/thumb/1/11/Peking2013_part_109-XylS-TT.png/800px-", width=600px; />
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'''Fig 1''' Construction of biosensor circuit ''Pm''/J23109-XylS
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== '''Sequence and Features''' ==
  
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===Usage and Biology===
 
  
 
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<span class='h3bb'>Sequence and Features</span>
 
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== '''Data shown''' ==
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Induction ratio of XylS biosensor library from ON/OFF test that utilizes different Pc promoters to control the expression of XylS.('''Fig 2''')
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'''Fig 2'''  Horizontal axis stands for different XylS biosensor with Pc promoters of different strength. The expression strength of these constitutive promoters, J23113, J23109, J23114, J23105, J23106 is 21, 106, 256, 623, and 1185, respectively, according to the Partsregistry. Four kinds of aromatics, namely BzO, 2-MxeBzO, 3-MeBzO and 4-MeBzO, shown with different color intensities, were tested following Test Protocol 1 (a hyper link is needed here). Vertical axis represents the ON-OFF induction ratio. The Pm/XylS expression system which adopted Pc promoter J23114 clearly performed best of all of the four inducers.
  
  
 
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===Functional Parameters===
 
===Functional Parameters===
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Revision as of 09:01, 24 September 2013

J23105-XylS-Terminator


Characterization

In order to fine-tune the performance of XylS biosensor, we constructed a library of Pc constitutive promoters at different intensity. BBa_K1031912 is composed of three elements, the constitutive Pc promoter J23109[1], coding sequence of XylS and terminator B0015[2]. (Fig 1)

Fig 1 Construction of biosensor circuit Pm/J23109-XylS


Sequence and Features

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 7
    Illegal NheI site found at 30
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 93
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 815
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI.rc site found at 278


Data shown

Induction ratio of XylS biosensor library from ON/OFF test that utilizes different Pc promoters to control the expression of XylS.(Fig 2)

Fig 2 Horizontal axis stands for different XylS biosensor with Pc promoters of different strength. The expression strength of these constitutive promoters, J23113, J23109, J23114, J23105, J23106 is 21, 106, 256, 623, and 1185, respectively, according to the Partsregistry. Four kinds of aromatics, namely BzO, 2-MxeBzO, 3-MeBzO and 4-MeBzO, shown with different color intensities, were tested following Test Protocol 1 (a hyper link is needed here). Vertical axis represents the ON-OFF induction ratio. The Pm/XylS expression system which adopted Pc promoter J23114 clearly performed best of all of the four inducers.