Difference between revisions of "Part:BBa K342002:Design"
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<p>The phasin protein bind to the granule membrane. The second phasin makes the binding stronger and then increases the rate of purified protein during the step of granules extraction. The intein is a self cleavable protein which breaks under PH=6 and allows the release od the fused protein at the end of the sequence</p> | <p>The phasin protein bind to the granule membrane. The second phasin makes the binding stronger and then increases the rate of purified protein during the step of granules extraction. The intein is a self cleavable protein which breaks under PH=6 and allows the release od the fused protein at the end of the sequence</p> | ||
− | <p>The prefix biobrick standard used contains a <a href="http://2009.igem.org/Team:Paris/Parts_RBS#bottom"><font color= black><i><u>perfect RBS</u></i></a> < | + | <p>The prefix biobrick standard used contains a <a href="http://2009.igem.org/Team:Paris/Parts_RBS#bottom"><font color= black><i><u>perfect RBS</u></i></a>. <br/> |
The suffix is a silver standard fusion suffix :The phasin sequence is the same as the biobrick <a href="https://parts.igem.org/Part:BBa_K208001"><font color= "black"><i><u>BBa_K208001</u></i></font></a> from the Utah 2009 team. The sequence | The suffix is a silver standard fusion suffix :The phasin sequence is the same as the biobrick <a href="https://parts.igem.org/Part:BBa_K208001"><font color= "black"><i><u>BBa_K208001</u></i></font></a> from the Utah 2009 team. The sequence | ||
<p>The sequencing of this part is difficult because of the repetition of phasin's sequence.</p> | <p>The sequencing of this part is difficult because of the repetition of phasin's sequence.</p> |
Revision as of 16:38, 25 October 2010
Phasin-Phasin Intein (for silver standard fusion)
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21INCOMPATIBLE WITH RFC[21]Illegal XhoI site found at 1693
- 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal AgeI site found at 1279
- 1000COMPATIBLE WITH RFC[1000]
Design Notes
This part is a self cleavable fusion protein. It has been designed thanks to the results of the publication
Banki et al.
The phasin protein bind to the granule membrane. The second phasin makes the binding stronger and then increases the rate of purified protein during the step of granules extraction. The intein is a self cleavable protein which breaks under PH=6 and allows the release od the fused protein at the end of the sequence The prefix biobrick standard used contains a perfect RBS. The sequencing of this part is difficult because of the repetition of phasin's sequence.
The suffix is a silver standard fusion suffix :The phasin sequence is the same as the biobrick BBa_K208001 from the Utah 2009 team. The sequence
Source
Ligation of two synthetized parts : Phasin and Phasin-Intein