Difference between revisions of "Part:BBa K3930008"
Line 9: Line 9:
 
<h2>Introduction</h2>
 
<h2>Introduction</h2>
 
<p>This sequence codes for the linalool synthase, which transform GPP into the flower-smelling compounds linalool, smelling like flower. The sequence derived from the <i>Lavandula angustifolia</i> genome. We take advantage of the publication of (Amiri et al. 2016).  
 
<p>This sequence codes for the linalool synthase, which transform GPP into the flower-smelling compounds linalool, smelling like flower. The sequence derived from the <i>Lavandula angustifolia</i> genome. We take advantage of the publication of (Amiri et al. 2016).  
−
<p>There is already BBa_K3052002 on the registry for linalool synthase. This part is codon optimized for translation in <i>E. coli</i>, but our is codon optimized for translation in <i>S. cerevisiae</i>.</p>
+
<p>There is already <a href="https://parts.igem.org/Part:BBa_K3052002" class="pr-0" target="_blank">(BBa_K3052002)</a> on the registry for linalool synthase. This part is codon optimized for translation in <i>E. coli</i>, but our is codon optimized for translation in <i>S. cerevisiae</i>.</p>
 
<h2>Testing</h2>
 
<h2>Testing</h2>
 
<p>This part is one of the component of the pFLEUR part <a href="https://parts.igem.org/Part:BBa_K3930000" class="pr-0" target="_blank">(BBa_K3930000)</a> and has been succesfully cloned into the LycoYeast S.cervisiae strain genome. The Toulouse team could not test this part for reasons of time, and preferred to focus on the parts characterization that allow the production of &alpha; and &beta;-ionone for the floral aspect of the violet perfume.</p>
 
<p>This part is one of the component of the pFLEUR part <a href="https://parts.igem.org/Part:BBa_K3930000" class="pr-0" target="_blank">(BBa_K3930000)</a> and has been succesfully cloned into the LycoYeast S.cervisiae strain genome. The Toulouse team could not test this part for reasons of time, and preferred to focus on the parts characterization that allow the production of &alpha; and &beta;-ionone for the floral aspect of the violet perfume.</p>

Revision as of 16:44, 16 October 2021


Gene coding for the Linalool synthase Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal SpeI site found at 1135
    Illegal PstI site found at 23
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal SpeI site found at 1135
    Illegal PstI site found at 23
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal SpeI site found at 1135
    Illegal PstI site found at 23
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal SpeI site found at 1135
    Illegal PstI site found at 23
  • 1000
    COMPATIBLE WITH RFC[1000]


Introduction

This sequence codes for the linalool synthase, which transform GPP into the flower-smelling compounds linalool, smelling like flower. The sequence derived from the Lavandula angustifolia genome. We take advantage of the publication of (Amiri et al. 2016).

There is already (BBa_K3052002) on the registry for linalool synthase. This part is codon optimized for translation in E. coli, but our is codon optimized for translation in S. cerevisiae.

Testing

This part is one of the component of the pFLEUR part (BBa_K3930000) and has been succesfully cloned into the LycoYeast S.cervisiae strain genome. The Toulouse team could not test this part for reasons of time, and preferred to focus on the parts characterization that allow the production of α and β-ionone for the floral aspect of the violet perfume.


References

  1. Amiri P, Shahpiri A, Asadollahi MA, Momenbeik F, Partow S. 2016. Metabolic engineering of Saccharomyces cerevisiae for linalool production. Biotechnol Lett. 38(3):503–508. doi:10.1007/s10529-015-2000-4.