Difference between revisions of "Part:BBa K3332022"
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<partinfo>BBa_K3332022 short</partinfo>
 
<partinfo>BBa_K3332022 short</partinfo>
  
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Subunit of phosphonate ABC transporter, ATP binding protein, from S.meliloti 1021.Use K823004 to construct a new part that can transport glyphosate to cytoplasm.
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Subunit of phosphonate ABC transporter, ATP binding protein, from ''S.meliloti'' 1021.Use <partinfo>K823004</partinfo> to construct a new part that can transport glyphosate to cytoplasm.
  
 
===Biology===
 
===Biology===
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Phn system is a gene cluster for organophosphorus transport and degradation in many microorganisms. ''Sinorhizobium meliloti'' 1021 encode ABC transporter by phnEE, phnC, phnD gene, this transporter can transport glyphosate to cytoplasm. The phnC gene encodes ATP-binding protein and the phnD encodes phosphonate binding protein of the ABC transporter.
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&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Phn system is a gene cluster for organophosphorus transportation and degradation in many microorganisms. ''Sinorhizobium meliloti'' 1021 encodes ABC transporter by phnEE, phnC, phnD gene. This transporter can transport glyphosate to cytoplasm. The phnC gene encodes ATP-binding protein and the phnD encodes phosphonate binding protein of the ABC transporter.
 
===Usage===
 
===Usage===
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We ligased the strong promoter (BBa_J23100) and the parts (RBS-phnE1-RBS-phnE2-RBS-phnC-RBS-phnD-Terminator) on the expression vector pSB1C3 by standard assembly. Then the ligation mixture was transformed into ''E. coli'' DH5α & ''E. coli'' BL21(DE3), enabled the ''E. coli'' to transport glyphosate to cytoplasm at higher efficiency.
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&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;We ligased the strong promoter (<partinfo>BBa_J23100</partinfo>) and the part J23100-RBS-phnE1-RBS-phnE2-J23100-RBS-phnJ-Terminator(<partinfo>BBa_K3332097</partinfo>) on the expression vector pSB1C3 by standard assembly. Then the ligation mixture was transformed into ''E. coli'' DH5α & ''E. coli'' BL21(DE3), enabled the ''E. coli'' to transport glyphosate to cytoplasm at higher efficiency.
 
===Characterization===
 
===Characterization===
  

Revision as of 17:28, 27 October 2020


phnC

Subunit of phosphonate ABC transporter, ATP binding protein, from S.meliloti 1021.Use BBa_K823004 to construct a new part that can transport glyphosate to cytoplasm.

Biology

        Phn system is a gene cluster for organophosphorus transportation and degradation in many microorganisms. Sinorhizobium meliloti 1021 encodes ABC transporter by phnEE, phnC, phnD gene. This transporter can transport glyphosate to cytoplasm. The phnC gene encodes ATP-binding protein and the phnD encodes phosphonate binding protein of the ABC transporter.

Usage

        We ligased the strong promoter (BBa_J23100) and the part J23100-RBS-phnE1-RBS-phnE2-J23100-RBS-phnJ-Terminator(BBa_K3332097) on the expression vector pSB1C3 by standard assembly. Then the ligation mixture was transformed into E. coli DH5α & E. coli BL21(DE3), enabled the E. coli to transport glyphosate to cytoplasm at higher efficiency.

Characterization

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 112
    Illegal NgoMIV site found at 181
    Illegal NgoMIV site found at 420
    Illegal NgoMIV site found at 424
    Illegal NgoMIV site found at 805
    Illegal NgoMIV site found at 829
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 192
    Illegal SapI.rc site found at 358