Difference between revisions of "Part:BBa K3037003"
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The TU Dresden 2019 team design this biobrick in order to create a system for the short and quick detection of specific DNA sequences. | The TU Dresden 2019 team design this biobrick in order to create a system for the short and quick detection of specific DNA sequences. | ||
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+ | == Sequence == | ||
<partinfo>BBa_K3037003 SequenceAndFeatures</partinfo> | <partinfo>BBa_K3037003 SequenceAndFeatures</partinfo> |
Revision as of 21:39, 17 October 2019
Fusion protein dCas9 + HRP (MBP/dCas9/linker/HRP/Strep-tag)
Fusion protein | |
---|---|
Function | Colour detection of specific DNA sequences |
Use in | Escherichia coli |
RFC standard | RFC 25 compatible |
Backbone | pSB1C3 |
Submitted by | Team:TU_Dresden 2019[1] |
Contents
Overview
The TU Dresden 2019 team design this biobrick in order to create a system for the short and quick detection of specific DNA sequences.
The plasmid used for the expression of the construct was pSB1C3.
Characterization
Outline
We performed the following characterization experiments:
1) Expression in pOOC97 (BBa_K3037000):
Experiments in Detail
1) Expression in pOOC97 (BBa_K3037000):
The fusion protein was expressed using as a backbone the plasmid pOOC97 (BB_aK3037000)
The purpose of this experiment is to show that the Escherichia coli grows normaly after the induction of the expression of the fusion protein.
For this the development of the culture was monitored by measuring the OD at 600 nm during different time before and after induction with 1 mM IPTG. As shown in the curve the growing of the bacteria is not affected by the expression of the protein.
Sequence
- 10COMPATIBLE WITH RFC[10]
- 12INCOMPATIBLE WITH RFC[12]Illegal NheI site found at 2302
Illegal NheI site found at 5500 - 21INCOMPATIBLE WITH RFC[21]Illegal BglII site found at 381
Illegal BglII site found at 5742
Illegal BamHI site found at 4581
Illegal BamHI site found at 5314
Illegal XhoI site found at 5826 - 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI site found at 79