Difference between revisions of "Part:BBa K2718006"
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===<span class='h3bb'>Sequence and Features</span>=== | ===<span class='h3bb'>Sequence and Features</span>=== |
Revision as of 21:39, 16 October 2018
PLac Promoter-Methionine-y-Lyase-HisTag
The Plac promoter (BBa_R0011) is a hybrid regulatory region consisting of the promoter P(L) of phage lambda with the cI binding sites replaced with lacO1. The hybrid design allows for a strong promoter that can nevertheless be:
- repressed by LacI, the Lac inhibitor (i.e. repressor).
- induced by [http://openwetware.org/wiki/IPTG IPTG] in E.Coli DH5-alpha.
This promoter (BBa_R0011) is assembled with Methionine-y-lyase-Histag (BBa_K2718005) to produce the methionine-y-lyase-histag.
Protein production
Different growing conditions were tested to determine the best growing conditions. The production was also tested two types E.coli bacteria :
- DH5a
- BL21 DE3
To verify the production of methionine-y-lyase, an SDS PAGE was performed and stained with Coomassie blue using cells containing this Biobrick and a Western Blot was performed with anti-his tag antibodies, revealed with alkaline phosphatase.
Purification of the protein
The histidine tag present in c-terminal of the protein allows us to purify the protein on a nickel NTA column. In our case, the protein was purified using an "Akta pure" on Histrap column (GE Healthcare).
Fig 5. SDS PAGE after purification, NR = non-restraint, 1, 8 and 10-15 correspond to the eluted fractions
Protein activity
To characterize methionine-γ-lyase, activity tests were done :
- DTNB (5,5′-Dithiobis 2-nitrobenzoic acid) test : DTNB reacts with thiol group so for methionine-y-lyase, DTNB reacts with thiol group of methanethiol
- MTBH (3-Methyl-2-benzothiazolinone hydrazone hydrochloride hydrate) test : MBTH reacts with alpha-keto compounds so for methionine-y-lyase, MTBH reacts with 2 oxobutanoate.
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal NgoMIV site found at 217
Illegal NgoMIV site found at 730 - 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI.rc site found at 523