Difference between revisions of "Part:BBa K1088006"

Revision as of 18:08, 28 October 2013

B. subtilis dxs-AmilCP fusion (constitutive promoter)

This composite part consists of 5 sub parts

- - A strong constitutive promoter: BBa_J23100
  - A strong RBS: BBa_J15001
  - The coding region of dxs from B. subtilis: BBa_K1088000
  - A 10 amino acid protein linker: BBa_K105012
  - The AmilCP chromoprotein: BBa_K592009

The idea was to detect expression of the Dxs protein by the reporter amilCP fused via a linker to the Dxs protein. Unfortunately it seems that the amilCP protein does not work well as a protein-fusion reporter, and the color change was vague.

Sequence and Features

Assembly Compatibility:

10
INCOMPATIBLE WITH RFC[10]
Illegal EcoRI site found at 1108
Illegal EcoRI site found at 1765
Illegal PstI site found at 1166
Illegal PstI site found at 1612
12
INCOMPATIBLE WITH RFC[12]
Illegal EcoRI site found at 1108
Illegal EcoRI site found at 1765
Illegal NheI site found at 7
Illegal NheI site found at 30
Illegal PstI site found at 1166
Illegal PstI site found at 1612
21
INCOMPATIBLE WITH RFC[21]
Illegal EcoRI site found at 1108
Illegal EcoRI site found at 1765
23
INCOMPATIBLE WITH RFC[23]
Illegal EcoRI site found at 1108
Illegal EcoRI site found at 1765
Illegal PstI site found at 1166
Illegal PstI site found at 1612
25
INCOMPATIBLE WITH RFC[25]
Illegal EcoRI site found at 1108
Illegal EcoRI site found at 1765
Illegal PstI site found at 1166
Illegal PstI site found at 1612
Illegal NgoMIV site found at 1065
Illegal AgeI site found at 958
1000
INCOMPATIBLE WITH RFC[1000]
Illegal BsaI.rc site found at 907
Illegal SapI.rc site found at 1606

@@ Line 4: / Line 4: @@
 This composite part consists of 5 sub parts
-A strong constitutive promoter: [https://parts.igem.org/Part:BBa_J23100 BBa_J23100]
+***A strong constitutive promoter: [https://parts.igem.org/Part:BBa_J23100 BBa_J23100]
-A strong RBS: [https://parts.igem.org/Part:BBa_J15001 BBa_J15001]
+***A strong RBS: [https://parts.igem.org/Part:BBa_J15001 BBa_J15001]
-The coding region of ''dxs'' from ''B. subtilis'': [https://parts.igem.org/Part:BBa_K1088000 BBa_K1088000]
+***The coding region of ''dxs'' from ''B. subtilis'': [https://parts.igem.org/Part:BBa_K1088000 BBa_K1088000]
-A 10 amino acid protein linker: [https://parts.igem.org/Part:BBa_K105012 BBa_K105012]
+***A 10 amino acid protein linker: [https://parts.igem.org/Part:BBa_K105012 BBa_K105012]
-The AmilCP chromoprotein: [https://parts.igem.org/Part:BBa_K592009 BBa_K592009]
+***The AmilCP chromoprotein: [https://parts.igem.org/Part:BBa_K592009 BBa_K592009]
 The idea was to detect expression of the Dxs protein by the reporter amilCP fused via a linker to the Dxs protein. Unfortunately it seems that the amilCP protein does not work well as a protein-fusion reporter, and the color change was vague.