Difference between revisions of "Part:BBa K3505044"
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[[File:T--Thessaly--TET0-ECFP-digestion.png|600px|thumb|none|<i><b>Fig.2:</b>(U=Uncut C=Cut) (U=Uncut , C= Cut) Restriction digestion of TE: AndersonJ23115:Tet0-ECFP-double terminator(C1-C 4) with : EcoRV(C1-C2) , Expected bands : 2847+ 954 bp ,Positive result: C1,C2</i>]] | [[File:T--Thessaly--TET0-ECFP-digestion.png|600px|thumb|none|<i><b>Fig.2:</b>(U=Uncut C=Cut) (U=Uncut , C= Cut) Restriction digestion of TE: AndersonJ23115:Tet0-ECFP-double terminator(C1-C 4) with : EcoRV(C1-C2) , Expected bands : 2847+ 954 bp ,Positive result: C1,C2</i>]] | ||
− | === | + | ===Experimental Use and Experience=== |
This part ,AndersonJ23114:TetO:RBS-ECFP-Double terminator , is very important for our engineering success , as it is our reporter module that is regulated from LacI. In the presence of LacI the transcription unit is blocked and there is no-fluoresence signal. This is the visualisation behind the NOT-Gate device. When we completed the cloning experiments, we immediately started plate-reader assays in order to validate the expression of ECFP , in absence of LacI. This chart shows the expression of ECFP, after 16h of incubation at 37oC , using M9 Medium. | This part ,AndersonJ23114:TetO:RBS-ECFP-Double terminator , is very important for our engineering success , as it is our reporter module that is regulated from LacI. In the presence of LacI the transcription unit is blocked and there is no-fluoresence signal. This is the visualisation behind the NOT-Gate device. When we completed the cloning experiments, we immediately started plate-reader assays in order to validate the expression of ECFP , in absence of LacI. This chart shows the expression of ECFP, after 16h of incubation at 37oC , using M9 Medium. | ||
− | + | <p>Measurements are the average of 9 total replicates (3 biological replicates and 3 technical replicates per biological replicate). Error bars represent standard deviation of biological replicates | |
+ | [[File:T--Thessaly--fluo-te-le.png|700px|thumb|none|<i><b>Fig.3:</b>Validation that J23115-TetO <bbpart>BBa_K3505044</bbpart> and J23115-LacO fusion promoters are able to drive expression of ECFP.Expression of ECFP, after 16h of incubation at 37oC , using M9 Medium.</i>]] | ||
===Sequence and Features=== | ===Sequence and Features=== | ||
<partinfo>BBa_K3505044 SequenceAndFeatures</partinfo> | <partinfo>BBa_K3505044 SequenceAndFeatures</partinfo> |
Latest revision as of 00:46, 28 October 2020
pAndersonJ23115:TetO:RBS-eCFP -terminator
eCFP BBa_K3505020uder control of a constitutive promoter (andersonJ23115 with a tet operator) BBa_K3505014.
Usage and Biology
This Trancriscription Unit (TU) is continuesly activated exressing the eCFP protein as a reporter. The Tet operator that is downsteam the anderson exists for the TetR regulated inhibition.
Design Notes
The coding sequence was domesticated . We removed BsmBI ,BsaI , BtgZI, BpiI sites in order to be compatible with GoldenBraid and MoClo. The sequence is cloned in a1R BBa_K3505008 and has overhangs compatible for GoldenBraid cloning.
Verification of cloning
Experimental Use and Experience
This part ,AndersonJ23114:TetO:RBS-ECFP-Double terminator , is very important for our engineering success , as it is our reporter module that is regulated from LacI. In the presence of LacI the transcription unit is blocked and there is no-fluoresence signal. This is the visualisation behind the NOT-Gate device. When we completed the cloning experiments, we immediately started plate-reader assays in order to validate the expression of ECFP , in absence of LacI. This chart shows the expression of ECFP, after 16h of incubation at 37oC , using M9 Medium.
Measurements are the average of 9 total replicates (3 biological replicates and 3 technical replicates per biological replicate). Error bars represent standard deviation of biological replicates
Sequence and Features
- 10COMPATIBLE WITH RFC[10]
- 12INCOMPATIBLE WITH RFC[12]Illegal NheI site found at 11
Illegal NheI site found at 34 - 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]