Difference between revisions of "Part:BBa K1890031"

 
 
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<partinfo>BBa_K1890031 short</partinfo>
 
<partinfo>BBa_K1890031 short</partinfo>
  
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Enter a long description of the part so that users of your part know what it is, what it does, and how to use it in their projects.
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<h2>Introduction</h2>
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BolA is a gene that controls the morphology of <i>Escherichia coli</i> in the stress response [1].
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By overexpressing this gene at 37°C, naturally rod-shaped <i>E. coli</i> cells should become spherical [2].
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It is expressed under control of the strong constitutive promoter <partinfo>BBa_J23100</partinfo>, strong RBS <partinfo>BBa_B0030</partinfo> and
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terminators <partinfo>BBa_B0010</partinfo> and <partinfo>BBa_B0012</partinfo>.
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Our findings are that BolA under a constitutive promoter will result in elongated cells, because of a too high expression.
  
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<h2><span class='h3bb'>Sequence and Features</span></h2>
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<partinfo>BBa_K1890031 SequenceAndFeatures</partinfo>
  
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<!-- Add more about the biology of this part here
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<h2>Characterization</h2>
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===Usage and Biology===
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This part was expressed in <i>E. coli</i> BL21.
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The expected phenotype of the cells expressing BolA is very different from the phenotype
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of wildtype <i>E. coli</i>. If the gene is successfully overexpressed, the cells become round,
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which we can easily observe under a widefield microscope (Figure 1). In widefield microscopy,
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the whole sample is simultaneously illuminated using a white light source so the phenotype of the sample can be inspected.
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This is comparable to normal light microscopy.
  
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<html>
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<span class='h3bb'>Sequence and Features</span>
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    <figure>
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<partinfo>BBa_K1890031 SequenceAndFeatures</partinfo>
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        <center><img src="https://static.igem.org/mediawiki/2016/6/68/T--TU_Delft--BolA_con_widefield.png" width="60%">
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            <figcaption>
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                <b>Figure 1</b>: Widefield images of <i>E. coli</i> BL21 transformed with a gene not altering the cell shape (<a href="https://parts.igem.org/Part:BBa_K1890002">K1890002</a>) (A) and with this part (B).
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            </figcaption></center>
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    </figure>
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</html>
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In Figure 1A we can see cells with the characteristic wildtype <i>E. coli</i> phenotype; the cells are rod-shaped.
 +
Constitutive expression of the BolA gene, as shown in Figure 1B does not result in spherical cells: the cells are rod-shaped and elongated.
 +
This is probably because of the stress the constitutive expression puts on the cells.
 +
As mentioned before, BolA is a gene involved in the stress response of <i>E. coli</i> that changes the morphology of the cells.
 +
A too high expression of the gene could therefore change the morphology in an unexpected way,
 +
such as elongation, a phenomena that is often observed in <i>E. coli</i> [3].
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Expression under an inducible promoter usually puts less stress on the cell. Expression of the BolA gene
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under an inducible promoter did result in spherical cells (<partinfo>K1890030</partinfo>).
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<h2>References</h2>
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[1] Santos, J. M., Freire, P., Vicente, M., & Arraiano, C. M. (1999). The stationary‐phase morphogene bolA from Escherichia coli is induced by stress during early stages of growth. Molecular microbiology, 32(4), 789-798.
  
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[2] Aldea, M., Hernandez-Chico, C., De La Campa, A., Kushner, S., & Vicente, M. (1988). Identification, cloning, and expression of bolA, an ftsZ-dependent morphogene of Escherichia coli. Journal of bacteriology, 170(11), 5169-5176.
  
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<!-- Uncomment this to enable Functional Parameter display
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[3] Höltje, J.-V. (1998). Growth of the stress-bearing and shape-maintaining murein sacculus of Escherichia coli. Microbiology and Molecular Biology Reviews, 62(1), 181-203.
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===Functional Parameters===
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<partinfo>BBa_K1890031 parameters</partinfo>
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Latest revision as of 14:13, 19 October 2016


BolA gene with strong constitutive promoter, RBS and terminator

Introduction

BolA is a gene that controls the morphology of Escherichia coli in the stress response [1]. By overexpressing this gene at 37°C, naturally rod-shaped E. coli cells should become spherical [2]. It is expressed under control of the strong constitutive promoter BBa_J23100, strong RBS BBa_B0030 and terminators BBa_B0010 and BBa_B0012. Our findings are that BolA under a constitutive promoter will result in elongated cells, because of a too high expression.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 7
    Illegal NheI site found at 30
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 158
  • 1000
    COMPATIBLE WITH RFC[1000]

Characterization

This part was expressed in E. coli BL21. The expected phenotype of the cells expressing BolA is very different from the phenotype of wildtype E. coli. If the gene is successfully overexpressed, the cells become round, which we can easily observe under a widefield microscope (Figure 1). In widefield microscopy, the whole sample is simultaneously illuminated using a white light source so the phenotype of the sample can be inspected. This is comparable to normal light microscopy.

Figure 1: Widefield images of E. coli BL21 transformed with a gene not altering the cell shape (K1890002) (A) and with this part (B).

In Figure 1A we can see cells with the characteristic wildtype E. coli phenotype; the cells are rod-shaped. Constitutive expression of the BolA gene, as shown in Figure 1B does not result in spherical cells: the cells are rod-shaped and elongated. This is probably because of the stress the constitutive expression puts on the cells. As mentioned before, BolA is a gene involved in the stress response of E. coli that changes the morphology of the cells. A too high expression of the gene could therefore change the morphology in an unexpected way, such as elongation, a phenomena that is often observed in E. coli [3].

Expression under an inducible promoter usually puts less stress on the cell. Expression of the BolA gene under an inducible promoter did result in spherical cells (BBa_K1890030).

References

[1] Santos, J. M., Freire, P., Vicente, M., & Arraiano, C. M. (1999). The stationary‐phase morphogene bolA from Escherichia coli is induced by stress during early stages of growth. Molecular microbiology, 32(4), 789-798.

[2] Aldea, M., Hernandez-Chico, C., De La Campa, A., Kushner, S., & Vicente, M. (1988). Identification, cloning, and expression of bolA, an ftsZ-dependent morphogene of Escherichia coli. Journal of bacteriology, 170(11), 5169-5176.

[3] Höltje, J.-V. (1998). Growth of the stress-bearing and shape-maintaining murein sacculus of Escherichia coli. Microbiology and Molecular Biology Reviews, 62(1), 181-203.