Difference between revisions of "Part:BBa K1031923"

Revision as of 16:10, 22 October 2013

J23109-XylB-Terminator

For detailed information concerning XylB, please visit 2013 Peking iGEM Adaptors

Characterization

We achieved the concept of Adaptor by connecting XylC with XylS, and we want to further confirm whether other degradation enzymes could be added. So we construct XylB adaptor circuit adopting J23109 as constitutive promoter and B0015 as terminator (Fig 1)

Fig 1 Construction of adaptor circuit Pc/J23109-XylB. The orange arrowhead refers to constitutive Pc promoter. RBS is shown in green oval. The square in dark red stands for terminator B0015.

Sequence and Features

Assembly Compatibility:

10
COMPATIBLE WITH RFC[10]
12
INCOMPATIBLE WITH RFC[12]
Illegal NheI site found at 7
Illegal NheI site found at 30
21
COMPATIBLE WITH RFC[21]
23
COMPATIBLE WITH RFC[23]
25
COMPATIBLE WITH RFC[25]
1000
INCOMPATIBLE WITH RFC[1000]
Illegal BsaI.rc site found at 364

Data shown

(Fig 2).

Fig 2 Schematic diagrams for the plasmid circuits used as Adaptor: NahF and the Sensor: NahR. A constitutive promoter library for the expression of NahF was constructed to obtain the most appropriate expression level of NahF enzyme in E.coli. The number of the Standard Biological constitutive promoter Parts used in this study and its initiation strength is listed in the left portion of the figure. Promoters are presented in orange, RBS in light green, coding sequence in dark cyan, and terminators in dark red.

@@ Line 1: / Line 1: @@
 __NOTOC__
 <partinfo>BBa_K1031923 short</partinfo>
+<html>
+<p>For detailed information concerning XylB, please visit <a href="http://2013.igem.org/Team:Peking/Project/Plugins">2013 Peking iGEM Adaptors</a></p>
-J23109-XylB-Terminator
+<img src="https://static.igem.org/mediawiki/igem.org/c/c9/Peking_Logo.jpg" style="width:960px;"/>
+</html>
+== '''Characterization''' ==
+We achieved the concept of Adaptor by connecting XylC with XylS, and we want to further confirm whether other degradation enzymes could be added. So we construct XylB adaptor circuit adopting <html><a href="https://parts.igem.org/Part:BBa_J23109">J23109</a></html> as constitutive promoter and <html><a href="https://parts.igem.org/Part:BBa_B0015">B0015</a></html> as terminator ('''Fig 1''')
+<html>
+<img src="https://static.igem.org/mediawiki/2013/f/fc/Peking2013_part_109-XylB.png" style="width:450px; margin-left:220px" />
+<p style="text-align:center"><b>Fig 1</b> Construction of adaptor circuit <i>Pc</i>/J23109-XylB. The orange arrowhead refers to constitutive <i>Pc</i> promoter. RBS is shown in green oval. The square in dark red stands for terminator B0015.
+</html>
+== '''Sequence and Features''' ==
-<!-- Add more about the biology of this part here
-===Usage and Biology===
 <!-- -->
 <span class='h3bb'>Sequence and Features</span>
 <partinfo>BBa_K1031923 SequenceAndFeatures</partinfo>
+== '''Data shown''' ==
+('''Fig 2''').
+<html>
+<img src="https://static.igem.org/mediawiki/igem.org/0/07/Peking2013_Plugin_fig8.jpg" style="width:600; margin-left:150px" />
+<p style="text-align:center"><b>Fig 2</b> Schematic diagrams for the plasmid circuits used as Adaptor: NahF and the Sensor: NahR. A constitutive promoter library for the expression of NahF was constructed to obtain the most appropriate expression level of NahF enzyme in E.coli. The number of the Standard Biological constitutive promoter Parts used in this study and its initiation strength is listed in the left portion of the figure. Promoters are presented in orange, RBS in light green, coding sequence in dark cyan, and terminators in dark red.
+</html>
 <!-- Uncomment this to enable Functional Parameter display
 ===Functional Parameters===
-<partinfo>BBa_K1031923 parameters</partinfo>
+<partinfo>BBa_K1031621 parameters</partinfo>
 <!-- -->