Device

Part:BBa_K814011

Designed by: Nolan Kennedy, Michelle Goettge, Grayson Wawrzyn   Group: iGEM12_Minnesota   (2012-10-03)

scytonemin biosynthetic pathway, scyBAC

Our research has focused on novel biosynthetic pathways for UV-protectant compounds found in two distinct algal species. One leading to the production of the unrelated UV-screening compound scytonemin was cloned from Nostoc punctiforme. ScyB first converts tryptophan into 3-indole pyruvic acid, which is converted into a ketoacid intermediate by ScyA. ScyC then converts the ketoacid into an indole compound which spontaneously forms scytonemin.

This part is made of three basic parts and contains the scyB, scyA and scyC generators. This part could be used for scytonemin biosynthesis in E. coli


Pellet.png

Figure 1. Cell pellets of control and ScyBAC expressing E. coli. Note the brown color indicative of scytonemin production as previously reported by Balskus et al., 2011.

Balskus and Walsh, 2009. [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2766776/] Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal EcoRI site found at 849
    Illegal EcoRI site found at 2025
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal EcoRI site found at 849
    Illegal EcoRI site found at 2025
    Illegal NotI site found at 1202
    Illegal NotI site found at 2391
    Illegal NotI site found at 4486
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal EcoRI site found at 849
    Illegal EcoRI site found at 2025
    Illegal BglII site found at 134
    Illegal BglII site found at 1416
    Illegal BglII site found at 2605
    Illegal XhoI site found at 1210
    Illegal XhoI site found at 2399
    Illegal XhoI site found at 4494
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal EcoRI site found at 849
    Illegal EcoRI site found at 2025
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal EcoRI site found at 849
    Illegal EcoRI site found at 2025
    Illegal AgeI site found at 3265
  • 1000
    COMPATIBLE WITH RFC[1000]


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