Composite
Operon2

Part:BBa_K808007

Designed by: Valentina Herbring, Sebastian Palluk, Andreas Schmidt   Group: iGEM12_TU_Darmstadt   (2012-09-05)

putative terephtalate uptake operon2

putative terephtalate uptake operon2

AraProm_RBS_tctA-505_RBS_tctB-197_RBS_tphC


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 1792
    Illegal BglII site found at 2797
    Illegal BamHI site found at 1144
    Illegal BamHI site found at 4284
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 1428
    Illegal NgoMIV site found at 2037
    Illegal NgoMIV site found at 2421
    Illegal NgoMIV site found at 3610
    Illegal NgoMIV site found at 4042
    Illegal AgeI site found at 979
    Illegal AgeI site found at 3301
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 3124
    Illegal SapI site found at 961


References

  • Fukuhara, Y., K. Inakazu, et al. (2010). "Characterization of the isophthalate degradation genes of Comamonas sp. strain E6." Appl Environ Microbiol 76(2): 519-527.
  • Kamimura, N., T. Aoyama, et al. (2010). "Characterization of the protocatechuate 4,5-cleavage pathway operon in Comamonas sp. strain E6 and discovery of a novel pathway gene." Appl Environ Microbiol 76(24): 8093-8101.
  • Winnen, B., R. N. Hvorup, et al. (2003). "The tripartite tricarboxylate transporter (TTT) family." Res Microbiol 154(7): 457-465.
[edit]
Categories
Parameters
None