Primer

Part:BBa_K5232010

Designed by: Fumiya Kashiwai   Group: iGEM24_UTokyo   (2024-09-28)

Usage and Biology

It has a sequence complementary to hsa-miR-10b-5p on the 5' end side and complementary to template0 on the 3' end side ^[1].

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Figure 1.
Figure 2.

The larger this ratio, the more clearly the target concentration can be distinguished. For Biomarker 1, when the condition was 12-5, that is, when the hybridize length between template and target was 12 bp, and the hybridize length between template and helper was 5 bp, the ratio was the largest.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]

References

Qing, Z., Feng, C.,Feng, X., Yongxi, Z., & Chunhai, F. (2014). Target-Triggered Three-Way Junction Structure and Polymerase/Nicking Enzyme Synergetic Isothermal Quadratic DNA Machine for Highly Specific, One-Step, and Rapid MicroRNA Detection at Attomolar Level. Anal. Chem. 2014, 86, 16, 8098-8105. https://doi-org.utokyo.idm.oclc.org/10.1021/ac501038r


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