Regulatory

Part:BBa_K5210014

Designed by: yitian zhou   Group: iGEM24_NMU-China   (2024-09-30)


Pompc

This promoter comes from E.coli and is involved in osmotic regulation. In case of high osmolarity in the medium, the protein kinase EnvZ, located in the cytoplasmic membrane, phosphorylates the transcription factor OmpR[1]. Phosphorylated OmpR binds the ompC promoter and activates the transcription[2].


Usage and Biology

In our luminescence circuit, Pompc acts as the promoter sensing the high osmolarity in the sea.In case of high osmolarity, the protein kinase phosphorylates the transcription factor OmpR. Phosphorylated OmpR binds the PompC promoter and activates the transcription of LuxCDEFG downstream of the pOmpc promoter.This Enyz-OmpR two component system provides substrate LuxCDEFG for luxAB oxidative luminescence. We use this part for the composite part BBa_K5210017.



Experiment results

We characterized the performance of this promoter in terms of reporter gene expression.



A.plasmid construction;

B.pre-experiment to explore the suitable growth concentration of experimental bacterium BL21;

C. fluorescence intensity of engineered bacteria under different osmotic pressures;

D. Fluorescence microscope to observe the fluorescence intensity of engineered bacteria under different osmotic pressures.

Reference

[1]Cai, Sheng Jian, and Masayori Inouye. “EnvZ-OmpR interaction and osmoregulation in Escherichia coli.” The Journal of biological chemistry vol. 277,27 (2002): 24155-61. doi:10.1074/jbc.M110715200

[2]Kenney LJ, Anand GS. EnvZ/OmpR Two-Component Signaling: An Archetype System That Can Function Noncanonically. EcoSal Plus. 2020 Jan;9(1):10.1128/ecosalplus.ESP-0001-2019. doi: 10.1128/ecosalplus.ESP-0001-2019


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal XbaI site found at 2
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal XbaI site found at 2
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal XbaI site found at 2
  • 1000
    COMPATIBLE WITH RFC[1000]


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