Coding

Part:BBa_K5040000

Designed by: Chun Ying Yu   Group: iGEM24_CCU-Taiwan   (2024-09-16)


Zif268-rlinker- m-hTPH1

The fusion protein of m-hTPH1 and Zif268 binding domain with 36 bp rigid linker. m-hTPH1 is truncated form of TPH genes, TPH1 mutant with a deletion of first 99 N-terminal and last 24 C-terminal amino acids. Zif268 is a naturally occurring 3-finger ZF. It binds the 9 bp sequence 5'-GCG TGG GCG-3'

Experimental result

After confirming the cloning, we induced the Zif268-rlinker-m-hTPH1 fusion protein expression by treating IPTG at 37°C in different induction time and IPTG concentration.

tph1-0-4-8-medium.jpeg

Fig. The Coomassie Blue staining of SDS-PAGE analysis of the Zif268-rlinker-m-hTPH1 fusion protein at 0, 4, and 8 hours of IPTG induction. Sup: supernatant; P: pellet

As presented above, we discovered that the individual expression of the Zif268-rlinker-m-hTPH1 fusion protein was unsuccessful; therefore, we extended induction time and increased IPTG concentration.

tph1-0-12-24-s.jpeg

Fig. The Coomassie Blue staining of SDS-PAGE analysis of the Zif268-rlinker-m-hTPH1 fusion protein at 0, 12, and 24 hours of IPTG induction. Sup: supernatant; P: pellet

tph1-0-2-0-4-0-8s.jpeg

Fig. The Coomassie Blue staining of SDS-PAGE analysis of the Zif268-rlinker-m-hTPH1 fusion protein induced with IPTG concentrations of 0.2 mM, 0.4 mM, and 0.8 mM at 8 hours.

However, we also found that co-expressing Zif268-rlinker-m-hTPH1, PBSII-rlinker-hPCBD1, and ZFa-hQDPR resulted in successful expression of Zif268-rlinker-m-hTPH1.

t-p-q-0-4-8-s.jpeg

Fig. The Coomassie Blue staining of SDS-PAGE analysis of co-expressing Zif268-rlinker-m-hTPH1, PBSII-rlinker-hPCBD1, and ZFa-hQDPR fusion protein at 0, 4, and 8 hours of IPTG induction. Sup: supernatant; P: pellet


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 338
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


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