Composite

Part:BBa_K4885002:Design

Designed by: Leyu Xu   Group: iGEM23_Nanjing-SDG   (2023-09-30)


Pthl-adhE2-Dac


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 3300
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


Design Notes

By comparing the butanol synthesis pathway of Clostridium acetobutylicum and the butyrate synthesis pathway of C. tyrobutyricum, it was found that we can introduce a single enzyme, an alcohol/aldehyde bifunctional dehydrogenase, to construct a butanol synthesis pathway in C. tyrobutyricum. By expressing adhE2 gene in C. tyrobutyricum, we can construct the butanol synthesis pathway. We used a strong transcriptional promoter, Pthl, in C. tyrobutyricum L319 for robust expression of adhE2. We propose that in C. tyrobutyricum, acetylation and deacetylation are important in reducing intermediate accumulation and controlling the carbon flow to different products such as butyrate and acetate by regulating the activities of related enzymes. The deacetylase coded by Dac plays an essential role in the deacetylation in C. tyrobutyricum. We used this native Dac gene to construct the recombinant plasmid of pMTL-Pthl-adhE2-Pcat1-Dac to overexpress adhE2 and Dac in C. tyrobutyricum. We used a strong transcriptional promoter, Pcat1, in C. tyrobutyricum L319 for robust expression of Dac. By enhancing the expression of deacetylase, we can enhance the acetylation and deacetylation interplay in the synthesis pathway of butyrate and butanol, and thus improve the efficiency of the pathway. In this way, the yields of butyrate and butanol can be increased.


Source

Pthl sequence is from BBa_K3443002

RBS sequence is from BBa_K103015

adhE2 sequence is from BBa_K1462060

Dac sequence is from BBa_K4885000

terminator sequence is from BBa_K3585002

References