Protein_Domain

Part:BBa_K4618105:Design

Designed by: PO-YANG PENG   Group: iGEM23_CSMU-Taiwan   (2023-10-11)


Hydrophobin + NG tag


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 702
    Illegal XhoI site found at 496
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


Design Notes

This sequence is combined with Hydrophobin and NGTag. The function of Hydrophobin is increasing the hydrophilliicity of the surface and showed emulsion-stabilizing properties on the PET. And the function of NGtag is used to bind the catcher which combine with other protein. This sequence is derived from Enhanced Cutinase-Catalyzed Hydrolysis of Polyethylene Terephthalate by Covalent Fusion to Hydrophobins and Tailoring the Tag/Catcher System by Integrating Covalent Bonds and Noncovalent Interactions for Highly Efficient Protein Self-Assembly. However, we did not directly employ the sequences documented in the literature. We revise the sequence to let it fit E.coli more. Besides, incorporating the existing tag to remove the stop codon, eliminating the hydrophobin methionine, allowing the concatenation of both sequences into a single protein. Then we entrusted Twist Bioscience with its synthesis and subsequent cloning into a plasmid. We use this part in the biosafety level 1 laboratory. Because we used E.coli system to express this part, so we can’t promise it can be expressed in other system. Lastly, we employ SDS-PAGE to verify the accuracy of expressed protein's molecular weight.


Source

  GenBank: EHK16817.1

References

 Enhanced Cutinase-Catalyzed Hydrolysis of Polyethylene Terephthalate by Covalent Fusion to HydrophobinsAuthors: Doris Ribitsch, Enrique Herrero Acero, Agnieszka Przylucka, Sabine Zitzenbacher, Annemarie Marold, Caroline Gamerith, Rupert Tscheließnig, SHOW ALL (15 AUTHORS) , Georg M. Guebitz Research Article5 May 2015"