Composite

Part:BBa_K4244099

Designed by: Arthur Vancolen   Group: iGEM22_Wageningen_UR   (2022-10-12)


placUV5:ccdA + pcspA:ccdB

PcspA (BBa_K4244021) is a constitutive promoter that has a high rate of transcription but contains a long 5′ UTR of 159 bp that, at 37 °C, acquires an unstable secondary structure and leads to its degradation. On the other hand, at lower temperatures it forms a stable configuration, which allows translation. In this case, a toxin (ccdB) under control of the cspA promoter is expressed but counteracted by the antitoxin ccdA (BBa_K4244023), which in turn is expressed by being placed after the constitutive LacUV5 (BBa_M36801) [1]. At lower temperatures cspA stabilizes and ccdB overexpresses ccdA, which leads to cell death.


PcspA.png

This construct has been transformed in E. coli Nissle 1917 and tested with a temperature sensitive survival assay. This experiment has been carried out by plating overnight culture grown at 37°C in different agar plates, which are incubated at 37°C (control), 30°C, 25°C and 20°C. The result of this experiment, shown in Figure 1, allows to say that the pcspA with the toxin-antitoxin system works as there is no colony present at lower temperature than 37°C.

Figure 1: The temperature sensitive survival assay shows that with the pcspA system with toxin-antitoxin (ccdA-ccdB), no colonies are present in the plates incubated at temperatures below 37 °C compared to the control, the pcspA system with a reporter gene.


Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal XbaI site found at 44
    Illegal PstI site found at 1086
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal PstI site found at 1086
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal XbaI site found at 44
    Illegal PstI site found at 1086
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal XbaI site found at 44
    Illegal PstI site found at 1086
  • 1000
    COMPATIBLE WITH RFC[1000]


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