Composite

Part:BBa_K4129120:Design

Designed by: Magnus Haahr   Group: iGEM22_DTU-Denmark   (2022-10-10)


The fungal synthetic expression system with FunsTF01 and 6xLexO-Pmin


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal XbaI site found at 4174
    Illegal XbaI site found at 6087
    Illegal PstI site found at 141
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 911
    Illegal NheI site found at 2986
    Illegal PstI site found at 141
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 145
    Illegal BamHI site found at 2920
    Illegal BamHI site found at 3512
    Illegal BamHI site found at 5368
    Illegal XhoI site found at 701
    Illegal XhoI site found at 1083
    Illegal XhoI site found at 3661
    Illegal XhoI site found at 4038
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal XbaI site found at 4174
    Illegal XbaI site found at 6087
    Illegal PstI site found at 141
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal XbaI site found at 4174
    Illegal XbaI site found at 6087
    Illegal PstI site found at 141
    Illegal NgoMIV site found at 3078
    Illegal NgoMIV site found at 6004
    Illegal AgeI site found at 1290
    Illegal AgeI site found at 1438
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI.rc site found at 1117
    Illegal BsaI.rc site found at 5718
    Illegal SapI site found at 323


Design Notes

The assembly was standardised to assemble the cassettes in bulk.


Source

The individual parts were either salvaged from in-house plasmids or de novo synthesised:

  • BBa_K4129024 was salvaged from a in-house plasmid
  • FunsTF01 was de novo synthesised from IDT
  • BBa_K4129115 was salvaged from a in-house plasmid
  • BBa_J06504 salvaged from BBa_K3046004
  • BBa_K3669007 was salvaged from a in-house plasmid
  • BBa_K678036 was salvaged from a in-house plasmid