Coding

Part:BBa_K3955103

Designed by: Camilla Lane   Group: iGEM21_Lund   (2021-09-30)


DB3DB3 peptide fused with L. lactis Ups45 signal peptide

DB3DB3 is a peptide designed for inhibition of amyloid beta aggregation [1]. It has also shown to have inhibitory effects on curli fibre elongation [2].


Usp45 originates in Lactococcus lactis and is a major extracellular component [3]. Its secretion signal peptide has been shown to successfully cause secretion in L. reuteri when fused with GFP [4].

References

1. Klein A, Ziehm T, Tusche M, Buitenhuis J, Bartnik D, Boeddrich A et al. Optimization of the All-D Peptide D3 for Aβ Oligomer Elimination. PLOS ONE. 2016;11(4):e0153035.

2. Perov S, Lidor O, Salinas N, Golan N, Tayeb- Fligelman E, Deshmukh M et al. Structural Insights into Curli CsgA Cross-β Fibril Architecture Inspire Repurposing of Anti-amyloid Compounds as Anti-biofilm Agents. PLOS Pathogens. 2019;15(8):e1007978.

3. van Asseldonk M, de Vos W, Simons G. Functional analysis of the Lactococcus lactis usp45 secretion signal in the secretion of a homologous proteinase and a heterologous α-amylase. Molecular and General Genetics MGG. 1993;240(3):428-434.

4. Wu C, Chung T. Green fluorescent protein is a reliable reporter for screening signal peptides functional in Lactobacillus reuteri. Journal of Microbiological Methods. 2006;67(1):181-186.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


[edit]
Categories
Parameters
None