RNA
Part:BBa_K3657036:Design
Designed by: Jannik Berger Group: iGEM20_Heidelberg (2020-10-21)
RNA Linker binding MS2 Coat Protein and Antitermination Protein N
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]
Design Notes
Hammerhead ribozymes were introduced in order to ensure, that the transcript does not include artifacts from promoter or terminator. Those sequences could interfere with the secondary structure of the RNA. The hammerhead ribozymes were designed with help of the DesignSimple software.
The secondary structure of the RNA was predicted in order to ensure that the linker region does not interfere with the functional entities (hairpins).
Source
Synthetic