Coding

Part:BBa_K3142015

Designed by: Luo Xiaolin   Group: iGEM19_SZPT-CHINA   (2019-10-20)


LacR

Lac repressor (LacR) and operator sequences (O1 and O2) is part of the lactose operon derived from Lactobacillus delbrueckii.When the external pH value declines to 5.5, rcfB promoter will be highly upregulated. Along with that, the LacR gene, which is downstream of rcfB will be highly transcribed. The large translation of LacR, the repressor of lac operon in Lactobacillus delbrueckii, will inhibit the use of lactose in the bacteria.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 31
    Illegal NgoMIV site found at 934
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI.rc site found at 871
    Illegal SapI.rc site found at 600


Verification by A11Sg-AHPMprotein expression

First, we constructed a vector that regulates the expression of a protein of interest through the PrcfB promoter. The vector has the characteristic that when the pH is less than 5.5, the PrcfB promoter strongly expresses the LacR, and the LacR binds to the O1/O2 site to repress the production of the target protein. When the pH is greater than 5.5, the PrcfB promoter is weakly expressed, and the protein of interest can be expressed without being repressed. Fig 1 shows the regulation mechanism.

AMR5-1.png

Reference:

  • Madsen S M, Arnau J, Vrang A, et al. Molecular characterization of the pH-inducible and growth phase-dependent promoter P170 of Lactococcus lactis. Molecular Microbiology, 1999, 32(1):75-87.
  • Søren M. Madsen, Thomas Hindré, Jean-Paul Le Pennec, et al. Two acid-inducible promoters from Lactococcus lactis require the cis-acting ACiD-box and the transcription regulator RcfB. Molecular Microbiology, 2005, 56(3):735-746.
  • Ismail AKYOL, Ugur COMLEKCIOGLU, Asuman KARAKAS, Kalbiye SERDAROGLU, Mehmet Sait EKINCI, Emin OZKOSE. Regulation of the acid inducible rcfB promoter in Lactococcus lactis subsp. Lactis. Annals of Microbiology, 2008, 58 (2) 269-273.
[edit]
Categories
Parameters
None