Plasmid

Part:BBa_K243035

Designed by: Freiburg Bioware09   Group: iGEM09_Freiburg_bioware   (2009-10-20)

pJS419

The pJS419 vector is used as an expression vector. It has a weak Shine-Dalgano sequence that enables a lower expression level of the target protein compared to the same vector backbone with a strong one. This can be useful for proteins with a complex stucture or even slightly toxic proteins.

Pjs419.tif

Usage and Biology

The vector is used for expression of complex molecules in order not to overburden the expressing host cell. Also, it is used for proteins that tend to aggregate as well as for the expression of slightly toxic proteins. We used this vector containing a chloramphenicol resistance for the expression of the His-Dig-Split-Fok_a construct (BBa_K243036). Simultaneous expression of the other heterodimeric Fok construct His-FluA-Split-Fok_i (BBa_K243010) took place in a different vector pEx with an ampicillin resistance gene. This enables a positive selection of the bacteria strain XL1 blue cotransformed with both plasmids.
The left picture shows a map of the vector with an ampicillin resistance gene inserted. Due to the limited distance of the start codon to the included ribosome binding site, some restriction sites of the assembly standard 25 have been avoided during the design step.


Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal suffix found in sequence at 2266
    Illegal XbaI site found at 1382
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal SpeI site found at 2267
    Illegal PstI site found at 2281
    Illegal NotI site found at 2274
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 1494
    Illegal BamHI site found at 2365
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal suffix found in sequence at 2267
    Illegal XbaI site found at 1382
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal suffix found in sequence at 2257
    Illegal XbaI site found at 1382
    Illegal NgoMIV site found at 1390
    Illegal NgoMIV site found at 2498
    Illegal AgeI site found at 3832
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 2114


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