Composite
Part:BBa_K2350019:Design
Designed by: PIN-YU CHEN Group: iGEM17_NYMU-Taipei (2017-10-21)
R0010-B0034-Holin-B0010-B0012
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]
Design Notes
Because the gene sequences of endolysin and holin in different species of bacteriophages are different, we are not sure whether endolysin and holin from different species could cooperate well. Therefore, we choose the endolysin and the holin both are from enterobacteria phage T4.
Primer
- p0011 5' tatttctcctctttctctag 3'
- p0012 5' ctagtatttctcctctttctctag 3'
- p0017 5' cgctgatagtgctagtgtagatcg 3'
- p0018 5' gatagtgctagtgtagatcg 3'
- p0019 5' ctagatggcagcacctagaatatc 3'
- p0020 5' atggcagcacctagaatatc 3'
- p0021 5' agcgttatttagcccttcctaata 3'
- p0022 5' ttatttagcccttcctaata 3'
Source
The holin we used is from iGEM released parts, BBa_K112000, which is holin from enterobacteria phage T4.
References
- Yibo Shi, Yaxian YanEmail author, Wenhui Ji, Bin Du, Xiangpeng Meng, Hengan Wang and Jianhe Sun. (2012). Virology Journal 2012 9:70.
- 2014 Peking Team: http://2014.igem.org/Team:Peking/Suicide
- UniPort: http://www.uniprot.org/uniprot/P06808
- Wikipedia: https://en.wikipedia.org/wiki/Holin